RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 CYP2S1Q96SQ9 504 aa22.43■■□□□ 1.18
SYNE4-205ENST00000490730 CRTAC1Q9NQ79 661 aa22.43■■□□□ 1.18
SYNE4-205ENST00000490730 C2orf42Q9NWW7 574 aa22.43■■□□□ 1.18
SYNE4-205ENST00000490730 SOBPA7XYQ1 873 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 USP17L7P0C7H9 530 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 PDIA4P13667 645 aaKnown RBP22.42■■□□□ 1.18
SYNE4-205ENST00000490730 WARSP23381 471 aaKnown RBP22.42■■□□□ 1.18
SYNE4-205ENST00000490730 BDNFP23560 247 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 ANXA13P27216 316 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 MAGEA11P43364 429 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 TNNC1P63316 161 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 PKP1Q13835 747 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 PSMD6Q15008 389 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 MAPRE1Q15691 268 aaKnown RBP22.42■■□□□ 1.18
SYNE4-205ENST00000490730 RSPO4Q2I0M5 234 aaPredicted RBP22.42■■□□□ 1.18
SYNE4-205ENST00000490730 MDH1BQ5I0G3 518 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 RESP18Q5W5W9 173 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 LIMS2Q7Z4I7 341 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 SYNPOQ8N3V7 929 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 FSIP1Q8NA03 581 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 SLC22A12Q96S37 553 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 MRPL45Q9BRJ2 306 aaKnown RBP22.42■■□□□ 1.18
SYNE4-205ENST00000490730 CFAP45Q9UL16 551 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 CACNA1AO00555 2505 aa22.42■■□□□ 1.18
SYNE4-205ENST00000490730 OTOL1A6NHN0 477 aaPredicted RBP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 CST3P01034 146 aaPredicted RBP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 GNL1P36915 607 aaPredicted RBP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 SNRPFP62306 86 aaKnown RBP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 DNM1Q05193 864 aaKnown RBP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 FAM160A1Q05DH4 1040 aa22.41■■□□□ 1.18
SYNE4-205ENST00000490730 EHHADHQ08426 723 aa22.41■■□□□ 1.18
SYNE4-205ENST00000490730 GRSF1Q12849 480 aaKnown RBP eCLIP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 SRSF5Q13243 272 aaKnown RBP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 TRPC3Q13507 836 aa22.41■■□□□ 1.18
SYNE4-205ENST00000490730 SIM2Q14190 667 aaPredicted RBP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 ZNF268Q14587 947 aaPredicted RBP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 PUM1Q14671 1186 aaKnown RBP eCLIP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 KCNB1Q14721 858 aa22.41■■□□□ 1.18
SYNE4-205ENST00000490730 MTF1Q14872 753 aa22.41■■□□□ 1.18
SYNE4-205ENST00000490730 PDGFRLQ15198 375 aa22.41■■□□□ 1.18
SYNE4-205ENST00000490730 WDR72Q3MJ13 1102 aa22.41■■□□□ 1.18
SYNE4-205ENST00000490730 GPR161Q8N6U8 529 aaKnown RBP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 ARL14EPQ8N8R7 260 aaPredicted RBP22.41■■□□□ 1.18
SYNE4-205ENST00000490730 OR6B3Q8NGW1 331 aa22.41■■□□□ 1.18
SYNE4-205ENST00000490730 PTPRDP23468 1912 aa22.41■■□□□ 1.18
SYNE4-205ENST00000490730 GREB1Q4ZG55 1949 aa22.41■■□□□ 1.18
SYNE4-205ENST00000490730 ANAPC1Q9H1A4 1944 aa22.41■■□□□ 1.18
SYNE4-205ENST00000490730 PVALEFA0A1B0GWK0 134 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 C2orf78A6NCI8 922 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 K7ESF4 209 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 EXOC3O60645 756 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 PHACTR2O75167 634 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 PAPSS2O95340 614 aaPredicted RBP22.4■■□□□ 1.18
SYNE4-205ENST00000490730 AMPD2Q01433 879 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 LAIR1Q6GTX8 287 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 FSTL4Q6MZW2 842 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 VSTM1Q6UX27 236 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 LONP2Q86WA8 852 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 MYCBPAPQ8TBZ2 947 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 PCED1BQ96HM7 432 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 DUS2Q9NX74 493 aaKnown RBP22.4■■□□□ 1.18
SYNE4-205ENST00000490730 NXF1Q9UBU9 619 aaKnown RBP22.4■■□□□ 1.18
SYNE4-205ENST00000490730 SERTAD1Q9UHV2 236 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 DNAH14Q0VDD8 3507 aa22.4■■□□□ 1.18
SYNE4-205ENST00000490730 HOXC13P31276 330 aa22.39■■□□□ 1.17
SYNE4-205ENST00000490730 IFNAR2P48551 515 aa22.39■■□□□ 1.17
SYNE4-205ENST00000490730 KNOP1Q1ED39 458 aaKnown RBP22.39■■□□□ 1.17
SYNE4-205ENST00000490730 BMT2Q1RMZ1 405 aa22.39■■□□□ 1.17
SYNE4-205ENST00000490730 TMEM196Q5HYL7 178 aa22.39■■□□□ 1.17
SYNE4-205ENST00000490730 ATL3Q6DD88 541 aa22.39■■□□□ 1.17
SYNE4-205ENST00000490730 DENND5BQ6ZUT9 1274 aa22.39■■□□□ 1.17
SYNE4-205ENST00000490730 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.39■■□□□ 1.17
SYNE4-205ENST00000490730 CPA6Q8N4T0 437 aa22.39■■□□□ 1.17
SYNE4-205ENST00000490730 SPATA17Q96L03 361 aa22.39■■□□□ 1.17
SYNE4-205ENST00000490730 CGNQ9P2M7 1197 aaKnown RBP22.39■■□□□ 1.17
SYNE4-205ENST00000490730 WNT6Q9Y6F9 365 aa22.39■■□□□ 1.17
SYNE4-205ENST00000490730 HELZP42694 1942 aaKnown RBP22.39■■□□□ 1.17
SYNE4-205ENST00000490730 TRIM66O15016 1216 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 HRO43593 1189 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 HDCP19113 662 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 CASP4P49662 377 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 MYL6P60660 151 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 USP46P62068 366 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 SPEM2Q0P670 501 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 USP4Q13107 963 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 BIRC3Q13489 604 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 ZNF77Q15935 545 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 PKN3Q6P5Z2 889 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 CEP68Q76N32 757 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 SH3RF2Q8TEC5 729 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 OSCP1Q8WVF1 389 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 ZNF516Q92618 1163 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 CHFRQ96EP1 664 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 DPEP3Q9H4B8 488 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 EXOC1Q9NV70 894 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 TRPM5Q9NZQ8 1165 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 ATG2BQ96BY7 2078 aa22.38■■□□□ 1.17
SYNE4-205ENST00000490730 F8VP50 259 aa22.37■■□□□ 1.17
SYNE4-205ENST00000490730 TRDMT1O14717 391 aaKnown RBP22.37■■□□□ 1.17
SYNE4-205ENST00000490730 TACC1O75410 805 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms