RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 TM9SF1O15321 606 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 KLHL2O95198 593 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 SDC4P31431 198 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 POU5F1BQ06416 359 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 AP1B1Q10567 949 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 IL31Q6EBC2 164 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 ACAD11Q709F0 780 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 RNF135Q8IUD6 432 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 APLFQ8IW19 511 aaPredicted RBP13.38□□□□□ -0.27
SHOX2-205ENST00000490689 UBA3Q8TBC4 463 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 SEMA4DQ92854 862 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 THAP11Q96EK4 314 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 SYT15Q9BQS2 421 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 NMUR2Q9GZQ4 415 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 PIDD1Q9HB75 910 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 ZNF212Q9UDV6 495 aa13.38□□□□□ -0.27
SHOX2-205ENST00000490689 C2CD2LO14523 706 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 CCND2P30279 289 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 MMP14P50281 582 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 POLNQ7Z5Q5 900 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 RYBPQ8N488 228 aaPredicted RBP13.37□□□□□ -0.27
SHOX2-205ENST00000490689 ASAP3Q8TDY4 903 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 NDNQ99608 321 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 GORASP1Q9BQQ3 440 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 CADM1Q9BY67 442 aaKnown RBP13.37□□□□□ -0.27
SHOX2-205ENST00000490689 PFDN4Q9NQP4 134 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 KLHL8Q9P2G9 620 aaPredicted RBP13.37□□□□□ -0.27
SHOX2-205ENST00000490689 ARHGAP26Q9UNA1 814 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 SHOC2Q9UQ13 582 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 AURKCQ9UQB9 309 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 TPST1O60507 370 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 CYP1A2P05177 515 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 DUOXA2Q1HG44 320 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 FAM43BQ6ZT52 329 aaPredicted RBP13.37□□□□□ -0.27
SHOX2-205ENST00000490689 USP6NLQ92738 828 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 CHCHD3Q9NX63 227 aaKnown RBP13.37□□□□□ -0.27
SHOX2-205ENST00000490689 WARS2Q9UGM6 360 aaKnown RBP13.37□□□□□ -0.27
SHOX2-205ENST00000490689 BCL9O00512 1426 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 RGPD1P0DJD0 1748 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 PEX1O43933 1283 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 ANPEPP15144 967 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 IL1RL1Q01638 556 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 ZNF568Q3ZCX4 644 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 SLC26A11Q86WA9 606 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 USP13Q92995 863 aaPredicted RBP13.37□□□□□ -0.27
SHOX2-205ENST00000490689 TMEM109Q9BVC6 243 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 PCDH9Q9HC56 1237 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 CASZ1Q86V15 1759 aa13.37□□□□□ -0.27
SHOX2-205ENST00000490689 RAG1P15918 1043 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 GLRA2P23416 452 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 CIITAP33076 1130 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 CYP24A1Q07973 514 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 BST1Q10588 318 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 UBAP2LQ14157 1087 aaKnown RBP13.36□□□□□ -0.27
SHOX2-205ENST00000490689 MAPK6Q16659 721 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 DENND5BQ6ZUT9 1274 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 GSTCDQ8NEC7 633 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 SHC3Q92529 594 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 WDR18Q9BV38 432 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 GRIP2Q9C0E4 1043 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 UPF3AQ9H1J1 476 aaKnown RBP13.36□□□□□ -0.27
SHOX2-205ENST00000490689 RNF146Q9NTX7 359 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 TRPC5Q9UL62 973 aaPredicted RBP13.36□□□□□ -0.27
SHOX2-205ENST00000490689 SOX13Q9UN79 622 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 FRMPD4Q14CM0 1322 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 NRXN3Q9Y4C0 1643 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 TBC1D12O60347 775 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 SLC12A1Q13621 1099 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 ACSBG2Q5FVE4 666 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 PGBD4Q96DM1 585 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 TAAR1Q96RJ0 339 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 RPF1Q9H9Y2 349 aaKnown RBP13.36□□□□□ -0.27
SHOX2-205ENST00000490689 GRID1Q9ULK0 1009 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 ACTL7BQ9Y614 415 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 DISP2A7MBM2 1401 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 LPCAT4Q643R3 524 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 ABRAQ8N0Z2 381 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 SH3TC2Q8TF17 1288 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 ZNF606Q8WXB4 792 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 EZH1Q92800 747 aaPredicted RBP13.36□□□□□ -0.27
SHOX2-205ENST00000490689 PRPF18Q99633 342 aaKnown RBP13.36□□□□□ -0.27
SHOX2-205ENST00000490689 ASCC2Q9H1I8 757 aaPredicted RBP13.36□□□□□ -0.27
SHOX2-205ENST00000490689 USP21Q9UK80 565 aa13.36□□□□□ -0.27
SHOX2-205ENST00000490689 APOL1O14791 398 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 DCXO43602 365 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 ECE2O60344 883 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 SFNP31947 248 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 MSX2P35548 267 aaPredicted RBP13.35□□□□□ -0.27
SHOX2-205ENST00000490689 STX1BP61266 288 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 BAATQ14032 418 aaPredicted RBP13.35□□□□□ -0.27
SHOX2-205ENST00000490689 ACAP1Q15027 740 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 HYIQ5T013 277 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 EMC10Q5UCC4 262 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 LRRC8EQ6NSJ5 796 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 FOXR2Q6PJQ5 311 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 ZNF677Q86XU0 584 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 CCDC138Q96M89 665 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 HSD17B14Q9BPX1 270 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 MRPL1Q9BYD6 325 aaKnown RBP13.35□□□□□ -0.27
SHOX2-205ENST00000490689 KPNA7A9QM74 516 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms