RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 C1RP00736 705 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 IL2RBP14784 551 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 ATP5JP18859 108 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 SLC6A9P48067 706 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 MTNR1BP49286 362 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 FAM193AP78312 1265 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 KIF23Q02241 960 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 SCAPQ12770 1279 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 MALLQ13021 153 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 PMS2P11Q13670 270 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 UBXN2BQ14CS0 331 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 POSTNQ15063 836 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 CNN3Q15417 329 aaKnown RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 UAP1L1Q3KQV9 507 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 ABHD17BQ5VST6 288 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 KLHDC7AQ5VTJ3 777 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 HIBCHQ6NVY1 386 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 JMJD6Q6NYC1 403 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 USP45Q70EL2 814 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 ANKRD23Q86SG2 305 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 DENND1CQ8IV53 801 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 KRT78Q8N1N4 520 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 CCHCR1Q8TD31 782 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 RILPL2Q969X0 211 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 CDK5RAP3Q96JB5 506 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 COQ10AQ96MF6 247 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 SORBS1Q9BX66 1292 aaKnown RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 ALOXE3Q9BYJ1 711 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 UNKQ9C0B0 810 aaKnown RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 ATP6V0A4Q9HBG4 840 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 KIAA1586Q9HCI6 787 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 ZNF277Q9NRM2 450 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 LANCL2Q9NS86 450 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 FBXO34Q9NWN3 711 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 MOCS1Q9NZB8 636 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 TESQ9UGI8 421 aaKnown RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 SLC23A1Q9UHI7 598 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 FRMD4BQ9Y2L6 1034 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 LRCH1Q9Y2L9 728 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 ACTL7AQ9Y615 435 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 AATKQ6ZMQ8 1374 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 POLA1P09884 1462 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 ABCC8Q09428 1581 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 PRDM2Q13029 1718 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 AQRO60306 1485 aaKnown RBP eCLIP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 A0A1B0GTW7 788 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 GOLIM4O00461 696 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 AREL1O15033 823 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 ANP32CO43423 234 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 DHX16O60231 1041 aaKnown RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 TIPRLO75663 272 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 TBX18O95935 607 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 POMCP01189 267 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 TSHRP16473 764 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 HTR1BP28222 390 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 PCSK1P29120 753 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 PTH2RP49190 550 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 AGFG1P52594 562 aaKnown RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 OCA2Q04671 838 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 FAPQ12884 760 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 DGKKQ5KSL6 1271 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 ZNF529Q6P280 563 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 FBXO42Q6P3S6 717 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 APOA5Q6Q788 366 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 CRELD2Q6UXH1 353 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 UBE3BQ7Z3V4 1068 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 GPR149Q86SP6 731 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 MIER2Q8N344 545 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 SLC44A3Q8N4M1 653 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 RNF152Q8N8N0 203 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 SIMC1Q8NDZ2 872 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 OR2I1PQ8NGU4 316 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 COA7Q96BR5 231 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 HVCN1Q96D96 273 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 CHCHD6Q9BRQ6 235 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 TTLL2Q9BWV7 592 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 C22orf23Q9BZE7 217 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 R3HDMLQ9H3Y0 253 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 PRDM13Q9H4Q3 707 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 ARFGAP3Q9NP61 516 aa3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 MAGED1Q9Y5V3 778 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-204ENST00000489862 SYNJ1O43426 1573 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 DNMBPQ6XZF7 1577 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 TDRD9Q8NDG6 1382 aaKnown RBP3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 SYNDIG1LA6NDD5 238 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 AHCYL1O43865 530 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 RPN1P04843 607 aaKnown RBP3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 DHRS4L1P0CG22 281 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 KRT10P13645 584 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 FGFR4P22455 802 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 GALNSP34059 522 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 MPLP40238 635 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 RAD52P43351 418 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 MAPK10P53779 464 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 SLC5A3P53794 718 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 ADKP55263 362 aaKnown RBP3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 HSD11B2P80365 405 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 MXRA7P84157 204 aa3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 IFIT5Q13325 482 aaKnown RBP3.69□□□□□ -1.82
DEPDC1-204ENST00000489862 PDCD2Q16342 344 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms