RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 PAQR9Q6ZVX9 377 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 RTL10Q7L3V2 364 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 GPIHBP1Q8IV16 184 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 GLYCTKQ8IVS8 523 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 LRRC8AQ8IWT6 810 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 CEP295NLQ96MC4 621 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 NOX5Q96PH1 765 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 LPIN3Q9BQK8 851 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 DUSP16Q9BY84 665 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 NHEJ1Q9H9Q4 299 aaPredicted RBP14.7□□□□□ -0.06
C9orf3-221ENST00000489562 CSNK1G1Q9HCP0 422 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 PNPLA8Q9NP80 782 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 DMAP1Q9NPF5 467 aaPredicted RBP14.7□□□□□ -0.06
C9orf3-221ENST00000489562 KRT82Q9NSB4 513 aa14.7□□□□□ -0.06
C9orf3-221ENST00000489562 CLDN5O00501 218 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 XPO1O14980 1071 aaKnown RBP14.69□□□□□ -0.06
C9orf3-221ENST00000489562 AKR1B10O60218 316 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 AP1G2O75843 785 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 CALCAP01258 141 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 CYP1A1P04798 512 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-221ENST00000489562 PLEKP08567 350 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-221ENST00000489562 HAPLN1P10915 354 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-221ENST00000489562 GZMAP12544 262 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 BDNFP23560 247 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 SNX16P57768 344 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 RPL10AP62906 217 aaKnown RBP14.69□□□□□ -0.06
C9orf3-221ENST00000489562 LILRA6Q6PI73 481 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 CCDC149Q6ZUS6 474 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 TTC30AQ86WT1 665 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 TCEAL8Q8IYN2 117 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 ATAD1Q8NBU5 361 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 MSANTD4Q8NCY6 345 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 STK32AQ8WU08 396 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 HDAC7Q8WUI4 952 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 PGLYRP2Q96PD5 576 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 CHP1Q99653 195 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.69□□□□□ -0.06
C9orf3-221ENST00000489562 UBXN6Q9BZV1 441 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 TTYH1Q9H313 450 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-221ENST00000489562 NSUN3Q9H649 340 aaKnown RBP14.69□□□□□ -0.06
C9orf3-221ENST00000489562 TLE6Q9H808 572 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 CYLDQ9NQC7 956 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 SEPT11Q9NVA2 429 aaKnown RBP14.69□□□□□ -0.06
C9orf3-221ENST00000489562 FBXW11Q9UKB1 542 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 MYO16Q9Y6X6 1858 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 CHD7Q9P2D1 2997 aa14.69□□□□□ -0.06
C9orf3-221ENST00000489562 RFXAPO00287 272 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 SOX1O00570 391 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-221ENST00000489562 DDX3XO00571 662 aaKnown RBP eCLIP14.68□□□□□ -0.06
C9orf3-221ENST00000489562 PRRG1O14668 218 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 TGM5O43548 720 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 CLASP2O75122 1294 aaKnown RBP14.68□□□□□ -0.06
C9orf3-221ENST00000489562 CSPG5O95196 566 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 POU3F3P20264 500 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-221ENST00000489562 CYP2F1P24903 491 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 GRIK1P39086 918 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 GPD2P43304 727 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 PLA2G4AP47712 749 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 CLCN4P51793 760 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 KIF11P52732 1056 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 NOMO3P69849 1222 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 PLD1Q13393 1074 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 SLC18A3Q16572 532 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 DUSP6Q16828 381 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 CLEC16AQ2KHT3 1053 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 ASTE1Q2TB18 679 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-221ENST00000489562 LIN9Q5TKA1 542 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 DENND1BQ6P3S1 775 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 CLEC20AQ6ZU45 233 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 PALB2Q86YC2 1186 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 TMEM139Q8IV31 216 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 SLC30A5Q8TAD4 765 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 SECISBP2LQ93073 1101 aaKnown RBP14.68□□□□□ -0.06
C9orf3-221ENST00000489562 HSFY1Q96LI6 401 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 C8orf48Q96LL4 319 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 MIS12Q9H081 205 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 PLEKHA4Q9H4M7 779 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 PRDM12Q9H4Q4 367 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 ADAMTS1Q9UHI8 967 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 PCDHGC5Q9Y5F6 944 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 TRANK1O15050 2925 aa14.68□□□□□ -0.06
C9orf3-221ENST00000489562 ARHGAP6O43182 974 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 IPO7O95373 1038 aaKnown RBP14.67□□□□□ -0.06
C9orf3-221ENST00000489562 VNN2O95498 520 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 UNGP13051 313 aaPredicted RBP14.67□□□□□ -0.06
C9orf3-221ENST00000489562 ACADSBP45954 432 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 NSFP46459 744 aaKnown RBP14.67□□□□□ -0.06
C9orf3-221ENST00000489562 CENPCQ03188 943 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 PDE4CQ08493 712 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 DUSP4Q13115 394 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 MGAT5BQ3V5L5 792 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 PASD1Q8IV76 773 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 KREMEN2Q8NCW0 462 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 OLIG1Q8TAK6 271 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 UBA3Q8TBC4 463 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 SLC22A17Q8WUG5 538 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 SLC35F5Q8WV83 523 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 SPATA17Q96L03 361 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 PCDHB18PQ96TA0 734 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 SEPT5Q99719 369 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms