RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 CCDC70Q6NSX1 233 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 CNKSR3Q6P9H4 555 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 COLGALT2Q8IYK4 626 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 NIPA2Q8N8Q9 360 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 B3GALNT2Q8NCR0 500 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 SPATA18Q8TC71 538 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 GOLGA8SH3BPF8 625 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 CCDC188H7C350 402 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 PSTPIP1O43586 416 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 FGGP02679 453 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 ACAT1P24752 427 aaKnown RBP19.03■□□□□ 0.64
CD40-206ENST00000489304 CDR1P51861 262 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 BCAT1P54687 386 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 OGDHQ02218 1023 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 BST2Q10589 180 aaKnown RBP19.03■□□□□ 0.64
CD40-206ENST00000489304 PIGHQ14442 188 aaPredicted RBP19.03■□□□□ 0.64
CD40-206ENST00000489304 GLE1Q53GS7 698 aaKnown RBP19.03■□□□□ 0.64
CD40-206ENST00000489304 WDR93Q6P2C0 686 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 FNIP1Q8TF40 1166 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 CYLDQ9NQC7 956 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 ARGLU1Q9NWB6 273 aaPredicted RBP19.03■□□□□ 0.64
CD40-206ENST00000489304 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.03■□□□□ 0.64
CD40-206ENST00000489304 KIAA0100Q14667 2235 aaKnown RBP19.03■□□□□ 0.64
CD40-206ENST00000489304 ATP2C2O75185 946 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 UPP2O95045 317 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 ACRP10323 421 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 PYGMP11217 842 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 CCDC130P13994 396 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 RAG1P15918 1043 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 PTPN1P18031 435 aaKnown RBP19.03■□□□□ 0.64
CD40-206ENST00000489304 RFC1P35251 1148 aaPredicted RBP19.03■□□□□ 0.64
CD40-206ENST00000489304 OR1G1P47890 313 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 RPL34P49207 117 aaKnown RBP19.03■□□□□ 0.64
CD40-206ENST00000489304 SNX16P57768 344 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 PDE4CQ08493 712 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 SEL1L2Q5TEA6 688 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 KIAA0319Q5VV43 1072 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 PMF1Q6P1K2 205 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 DCLRE1AQ6PJP8 1040 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 TMEM110Q86TL2 294 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 RHOT1Q8IXI2 618 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 HNRNPABQ99729 332 aaKnown RBP19.03■□□□□ 0.64
CD40-206ENST00000489304 LRRC1Q9BTT6 524 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 NRDE2Q9H7Z3 1164 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 ST7Q9NRC1 585 aa19.03■□□□□ 0.64
CD40-206ENST00000489304 TTC3P53804 2025 aa19.02■□□□□ 0.64
CD40-206ENST00000489304 E5RJQ4 531 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 KRIT1O00522 736 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 CYP11A1P05108 521 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 ADORA2BP29275 332 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 RBM10P98175 930 aaKnown RBP19.02■□□□□ 0.63
CD40-206ENST00000489304 RNASELQ05823 741 aaKnown RBP19.02■□□□□ 0.63
CD40-206ENST00000489304 IKBKEQ14164 716 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 BRD3Q15059 726 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 LONRF2Q1L5Z9 754 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 NPAS4Q8IUM7 802 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 ABI1Q8IZP0 508 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 JOSD2Q8TAC2 188 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 SLC2A14Q8TDB8 520 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 RUBCNQ92622 972 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 METTL5Q9NRN9 209 aaKnown RBP19.02■□□□□ 0.63
CD40-206ENST00000489304 DDX43Q9NXZ2 648 aaKnown RBP19.02■□□□□ 0.63
CD40-206ENST00000489304 KANSL3Q9P2N6 904 aa19.02■□□□□ 0.63
CD40-206ENST00000489304 PRG3Q9Y2Y8 225 aaPredicted RBP19.02■□□□□ 0.63
CD40-206ENST00000489304 TBKBP1A7MCY6 615 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 M0QZQ0 153 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 TULP2O00295 520 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 ODC1P11926 461 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 RFC2P35250 354 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 CLCN6P51797 869 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 TAS2R40P59535 323 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 LRRC38Q5VT99 294 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 C8orf74Q6P047 294 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 TMCO2Q7Z6W1 182 aaPredicted RBP19.01■□□□□ 0.63
CD40-206ENST00000489304 RSPH1Q8WYR4 309 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 PLVAPQ9BX97 442 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 AP1M1Q9BXS5 423 aa19.01■□□□□ 0.63
CD40-206ENST00000489304 RNF216Q9NWF9 866 aaPredicted RBP19.01■□□□□ 0.63
CD40-206ENST00000489304 CCDC151A5D8V7 595 aa19■□□□□ 0.63
CD40-206ENST00000489304 F8VP50 259 aa19■□□□□ 0.63
CD40-206ENST00000489304 GABBR2O75899 941 aa19■□□□□ 0.63
CD40-206ENST00000489304 RGS7P49802 495 aa19■□□□□ 0.63
CD40-206ENST00000489304 OR6B2Q6IFH4 312 aa19■□□□□ 0.63
CD40-206ENST00000489304 AADACL2Q6P093 401 aa19■□□□□ 0.63
CD40-206ENST00000489304 CC2D1AQ6P1N0 951 aaPredicted RBP19■□□□□ 0.63
CD40-206ENST00000489304 FAM183BPQ6ZVS7 135 aa19■□□□□ 0.63
CD40-206ENST00000489304 KATNAL2Q8IYT4 538 aa19■□□□□ 0.63
CD40-206ENST00000489304 FUKQ8N0W3 1084 aa19■□□□□ 0.63
CD40-206ENST00000489304 FAM193BQ96PV7 902 aaPredicted RBP19■□□□□ 0.63
CD40-206ENST00000489304 KRT12Q99456 494 aa19■□□□□ 0.63
CD40-206ENST00000489304 RTP3Q9BQQ7 232 aa19■□□□□ 0.63
CD40-206ENST00000489304 CDH9Q9ULB4 789 aa19■□□□□ 0.63
CD40-206ENST00000489304 USTQ9Y2C2 406 aa19■□□□□ 0.63
CD40-206ENST00000489304 MICAL3Q7RTP6 2002 aa19■□□□□ 0.63
CD40-206ENST00000489304 CAPN2P17655 700 aa19■□□□□ 0.63
CD40-206ENST00000489304 MCM3P25205 808 aa19■□□□□ 0.63
CD40-206ENST00000489304 TKTP29401 623 aaKnown RBP19■□□□□ 0.63
CD40-206ENST00000489304 VSNL1P62760 191 aa19■□□□□ 0.63
CD40-206ENST00000489304 FAM102AQ5T9C2 384 aaPredicted RBP19■□□□□ 0.63
CD40-206ENST00000489304 DAB2IPQ5VWQ8 1189 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms