RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 SPATA17Q96L03 361 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 TDP1Q9NUW8 608 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 THG1LQ9NWX6 298 aaKnown RBP13.41□□□□□ -0.26
SRRM1-216ENST00000489130 GTSE1Q9NYZ3 720 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 TRAF3IP3Q9Y228 551 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 CCL26Q9Y258 94 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 KIF26AQ9ULI4 1882 aaPredicted RBP13.41□□□□□ -0.26
SRRM1-216ENST00000489130 SPECC1L-ADORA2AF8WAN1 911 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 PHACTR2O75167 634 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 ZNF202O95125 648 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 KIF20AO95235 890 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 LMNAP02545 664 aaKnown RBP13.4□□□□□ -0.26
SRRM1-216ENST00000489130 CHRNB1P11230 501 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 CTHP32929 405 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 SOX9P48436 509 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 KPNA1P52294 538 aaPredicted RBP13.4□□□□□ -0.26
SRRM1-216ENST00000489130 CYP27A1Q02318 531 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 CSTF1Q05048 431 aaKnown RBP13.4□□□□□ -0.26
SRRM1-216ENST00000489130 TNK2Q07912 1038 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 BIRC3Q13489 604 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 NCOA4Q13772 614 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 KCNB1Q14721 858 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 NFIL3Q16649 462 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 ZNF699Q32M78 642 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 MDH1BQ5I0G3 518 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 OR6B3Q8NGW1 331 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 RIN3Q8TB24 985 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 CCDC47Q96A33 483 aaKnown RBP13.4□□□□□ -0.26
SRRM1-216ENST00000489130 FAM83CQ9BQN1 747 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 LMAN1LQ9HAT1 526 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 GDPD2Q9HCC8 539 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 NXF1Q9UBU9 619 aaKnown RBP13.4□□□□□ -0.26
SRRM1-216ENST00000489130 PCDHGA2Q9Y5H1 932 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 OBSL1O75147 1896 aa13.4□□□□□ -0.26
SRRM1-216ENST00000489130 A8MXQ7 604 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 TRIM66O15016 1216 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 MAPK13O15264 365 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 CALUO43852 315 aaPredicted RBP13.39□□□□□ -0.27
SRRM1-216ENST00000489130 VNN1O95497 513 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 PTPN1P18031 435 aaKnown RBP13.39□□□□□ -0.27
SRRM1-216ENST00000489130 GRIK1P39086 918 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
SRRM1-216ENST00000489130 DLG4P78352 724 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 FAM160A1Q05DH4 1040 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 ZACNQ401N2 412 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 WDR44Q5JSH3 913 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 TXNDC11Q6PKC3 985 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 DENND5BQ6ZUT9 1274 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 ADSSL1Q8N142 457 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 GUF1Q8N442 669 aaKnown RBP13.39□□□□□ -0.27
SRRM1-216ENST00000489130 ZBTB44Q8NCP5 570 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 B3GALNT2Q8NCR0 500 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 TMC2Q8TDI7 906 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 C8orf48Q96LL4 319 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 TTLL2Q9BWV7 592 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 ELOVL4Q9GZR5 314 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 DPEP3Q9H4B8 488 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 SMYD3Q9H7B4 428 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 HPS4Q9NQG7 708 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 EHD2Q9NZN4 543 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 FRMD4BQ9Y2L6 1034 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 DENND4CQ5VZ89 1909 aa13.39□□□□□ -0.27
SRRM1-216ENST00000489130 CFAP54Q96N23 3096 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 F5P12259 2224 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 CACNA1IQ9P0X4 2223 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 TRAV19A0A0A6YYK7 116 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 IKBKBO14920 756 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 USP17L7P0C7H9 530 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 TDGF1P13385 188 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 ANXA13P27216 316 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 CDH8P55286 799 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 USP46P62068 366 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 ENPEPQ07075 957 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 LRRC32Q14392 662 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 GAS6Q14393 721 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 BECN1Q14457 450 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 ZNF77Q15935 545 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 ITPRIPL2Q3MIP1 535 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 ZNF667Q5HYK9 610 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 C1orf220Q5T0J3 134 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 CEP135Q66GS9 1140 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 TTC8Q8TAM2 541 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 SLC22A12Q96S37 553 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 FAM126AQ9BYI3 521 aaPredicted RBP13.38□□□□□ -0.27
SRRM1-216ENST00000489130 TRPC7Q9HCX4 862 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 GKN1Q9NS71 199 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 TMEM30AQ9NV96 361 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 ZSCAN32Q9NX65 697 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 GCNT4Q9P109 453 aa13.38□□□□□ -0.27
SRRM1-216ENST00000489130 FANCMQ8IYD8 2048 aa13.37□□□□□ -0.27
SRRM1-216ENST00000489130 PTPRDP23468 1912 aa13.37□□□□□ -0.27
SRRM1-216ENST00000489130 C2orf78A6NCI8 922 aa13.37□□□□□ -0.27
SRRM1-216ENST00000489130 OTOL1A6NHN0 477 aaPredicted RBP13.37□□□□□ -0.27
SRRM1-216ENST00000489130 F8VP50 259 aa13.37□□□□□ -0.27
SRRM1-216ENST00000489130 KINO60870 393 aaKnown RBP13.37□□□□□ -0.27
SRRM1-216ENST00000489130 LILRB5O75023 590 aa13.37□□□□□ -0.27
SRRM1-216ENST00000489130 AKAP3O75969 853 aa13.37□□□□□ -0.27
SRRM1-216ENST00000489130 ASS1P00966 412 aaKnown RBP13.37□□□□□ -0.27
SRRM1-216ENST00000489130 CKMP06732 381 aa13.37□□□□□ -0.27
SRRM1-216ENST00000489130 PFKLP17858 780 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms