RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 KCNN1Q92952 543 aa17.42■□□□□ 0.38
USP48-210ENST00000489108 MYRFLQ96LU7 910 aa17.42■□□□□ 0.38
USP48-210ENST00000489108 CCSER1Q9C0I3 900 aa17.42■□□□□ 0.38
USP48-210ENST00000489108 GCNT4Q9P109 453 aa17.42■□□□□ 0.38
USP48-210ENST00000489108 ATXN2Q99700 1313 aaKnown RBP17.42■□□□□ 0.38
USP48-210ENST00000489108 ITPR1Q14643 2758 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 C2orf78A6NCI8 922 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 H0Y626 953 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 TRIM16O95361 564 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 RPL10AP62906 217 aaKnown RBP17.41■□□□□ 0.38
USP48-210ENST00000489108 MRPS21P82921 87 aaKnown RBP17.41■□□□□ 0.38
USP48-210ENST00000489108 TSPY1Q01534 308 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 NFE2Q16621 373 aaPredicted RBP17.41■□□□□ 0.38
USP48-210ENST00000489108 HYIQ5T013 277 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 SFTPA1Q8IWL2 248 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 ALLCQ8N6M5 410 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 TXNDC5Q8NBS9 432 aaKnown RBP17.41■□□□□ 0.38
USP48-210ENST00000489108 TRMT2BQ96GJ1 504 aaKnown RBP17.41■□□□□ 0.38
USP48-210ENST00000489108 GTPBP2Q9BX10 602 aaKnown RBP17.41■□□□□ 0.38
USP48-210ENST00000489108 ASB7Q9H672 318 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 PILRBQ9UKJ0 227 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 C2CD2Q9Y426 696 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 GPSM3Q9Y4H4 160 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 FREM2Q5SZK8 3169 aa17.41■□□□□ 0.38
USP48-210ENST00000489108 ANKRD63C9JTQ0 380 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 SGK1O00141 431 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 KLF8O95600 359 aaPredicted RBP17.4■□□□□ 0.38
USP48-210ENST00000489108 NFATC1O95644 943 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 CFIP05156 583 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 HDCP19113 662 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 ITPKAP23677 461 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 PRPHP41219 470 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 ATXN3P54252 364 aaPredicted RBP17.4■□□□□ 0.38
USP48-210ENST00000489108 ZXDBP98169 803 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 MAP7D1Q3KQU3 841 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 EMC10Q5UCC4 262 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 LYSMD4Q5XG99 296 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 HDDC3Q8N4P3 179 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 SPACA7Q96KW9 195 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 KCND2Q9NZV8 630 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 SLC6A14Q9UN76 642 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 CEP192Q8TEP8 1941 aa17.4■□□□□ 0.38
USP48-210ENST00000489108 K7ENM7 598 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 LAD1O00515 517 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 TCF3P15923 654 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 ACAT1P24752 427 aaKnown RBP17.39■□□□□ 0.37
USP48-210ENST00000489108 TIE1P35590 1138 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 SLC6A11P48066 632 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 MESP2Q0VG99 397 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 SCAPQ12770 1279 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 SV2CQ496J9 727 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 RAB44Q7Z6P3 723 aaPredicted RBP17.39■□□□□ 0.37
USP48-210ENST00000489108 PDZD3Q86UT5 571 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 CCDC83Q8IWF9 413 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 DEFB119Q8N690 84 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 MYCT1Q8N699 235 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 IL17RCQ8NAC3 791 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 WHAMMQ8TF30 809 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 LEO1Q8WVC0 666 aaPredicted RBP17.39■□□□□ 0.37
USP48-210ENST00000489108 DDX43Q9NXZ2 648 aaKnown RBP17.39■□□□□ 0.37
USP48-210ENST00000489108 BCCIPQ9P287 314 aaKnown RBP eCLIP17.39■□□□□ 0.37
USP48-210ENST00000489108 GTF3C4Q9UKN8 822 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 ARHGAP26Q9UNA1 814 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 MYOFQ9NZM1 2061 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 LAMA5O15230 3695 aa17.39■□□□□ 0.37
USP48-210ENST00000489108 MYO18AQ92614 2054 aaKnown RBP17.38■□□□□ 0.37
USP48-210ENST00000489108 MYMKA6NI61 221 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 TISP43B9A030 160 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 SEC24BO95487 1268 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 CHRM1P11229 460 aaPredicted RBP17.38■□□□□ 0.37
USP48-210ENST00000489108 KCNB1Q14721 858 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 CCDC142Q17RM4 750 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 DUOXA1Q1HG43 343 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 COL28A1Q2UY09 1125 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 SPDYCQ5MJ68 293 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 ADALQ6DHV7 355 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 PDCL2Q8N4E4 241 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 FSIP1Q8NA03 581 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 HMGB4Q8WW32 186 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 ACBD6Q9BR61 282 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 REEP2Q9BRK0 252 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 ABCB6Q9NP58 842 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 POLMQ9NP87 494 aaPredicted RBP17.38■□□□□ 0.37
USP48-210ENST00000489108 ZDHHC4Q9NPG8 344 aa17.38■□□□□ 0.37
USP48-210ENST00000489108 HELZP42694 1942 aaKnown RBP17.37■□□□□ 0.37
USP48-210ENST00000489108 PLXND1Q9Y4D7 1925 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 LOC400499M0QZD8 3231 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 OPHN1O60890 802 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 CD59P13987 128 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 DPP6P42658 865 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 GFPT1Q06210 699 aaPredicted RBP17.37■□□□□ 0.37
USP48-210ENST00000489108 BYSLQ13895 437 aaKnown RBP17.37■□□□□ 0.37
USP48-210ENST00000489108 DHX8Q14562 1220 aaKnown RBP17.37■□□□□ 0.37
USP48-210ENST00000489108 ZNF423Q2M1K9 1284 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 INTS6LQ5JSJ4 861 aaKnown RBP17.37■□□□□ 0.37
USP48-210ENST00000489108 PEAR1Q5VY43 1037 aaPredicted RBP17.37■□□□□ 0.37
USP48-210ENST00000489108 LMBRD2Q68DH5 695 aaPredicted RBP17.37■□□□□ 0.37
USP48-210ENST00000489108 SCN4BQ8IWT1 228 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 ADGRG2Q8IZP9 1017 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 PGBD3Q8N328 593 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms