RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 GRXCR2A6NFK2 248 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 TEX33O43247 280 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 AP1G2O75843 785 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 CSH1P0DML2 217 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 CSH2P0DML3 217 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 CCDC130P13994 396 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 ATF6P18850 670 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 USP8P40818 1118 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 BPIFB4P59827 614 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 TFF2Q03403 129 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 SMAD2Q15796 467 aaKnown RBP16.93■□□□□ 0.3
HDAC7-224ENST00000488927 FMNL3Q8IVF7 1028 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 IQCDQ96DY2 449 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 LPIN3Q9BQK8 851 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 WDR6Q9NNW5 1121 aaKnown RBP16.93■□□□□ 0.3
HDAC7-224ENST00000488927 AVENQ9NQS1 362 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-224ENST00000488927 ASAH2Q9NR71 780 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 KRT82Q9NSB4 513 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 HESX1Q9UBX0 185 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 FHOD1Q9Y613 1164 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 COL6A3P12111 3177 aa16.93■□□□□ 0.3
HDAC7-224ENST00000488927 CLDN5O00501 218 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 ZNF197O14709 1029 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 MED7O43513 233 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 SOAT2O75908 522 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 NOL4O94818 638 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 ADORA2BP29275 332 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 KLK7P49862 253 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 POLR2FP61218 127 aaKnown RBP16.92■□□□□ 0.3
HDAC7-224ENST00000488927 PTK2Q05397 1052 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 DRAP1Q14919 205 aaPredicted RBP16.92■□□□□ 0.3
HDAC7-224ENST00000488927 DDR2Q16832 855 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 PABPC1LQ4VXU2 614 aaKnown RBP16.92■□□□□ 0.3
HDAC7-224ENST00000488927 PPP1R26Q5T8A7 1209 aaPredicted RBP16.92■□□□□ 0.3
HDAC7-224ENST00000488927 CYP4A22Q5TCH4 519 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 PAQR9Q6ZVX9 377 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 DNAJB7Q7Z6W7 309 aaPredicted RBP16.92■□□□□ 0.3
HDAC7-224ENST00000488927 FAM71AQ8IYT1 594 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 ASB2Q96Q27 587 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 SPAG5Q96R06 1193 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 NUP58Q9BVL2 599 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 DUSP16Q9BY84 665 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 CSNK1G1Q9HCP0 422 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 PNPLA8Q9NP80 782 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 IFNKQ9P0W0 207 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 UXTQ9UBK9 157 aaPredicted RBP16.92■□□□□ 0.3
HDAC7-224ENST00000488927 CLUHO75153 1309 aa16.92■□□□□ 0.3
HDAC7-224ENST00000488927 BRWD1Q9NSI6 2320 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 F8VP50 259 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 F8VZ95 297 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 RNF225M0QZC1 329 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-224ENST00000488927 FOXN3O00409 490 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-224ENST00000488927 MICAL2O94851 1124 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 NPR3P17342 541 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 CDR1P51861 262 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 EPHA5P54756 1037 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 CNGA2Q16280 664 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 MEA1Q16626 185 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 LCLAT1Q6UWP7 414 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 DENND5BQ6ZUT9 1274 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 PDZD4Q76G19 769 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-224ENST00000488927 CACNA2D4Q7Z3S7 1137 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 GRASPQ7Z6J2 395 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-224ENST00000488927 ANKRD52Q8NB46 1076 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 TRMT2BQ96GJ1 504 aaKnown RBP16.91■□□□□ 0.3
HDAC7-224ENST00000488927 CORO1BQ9BR76 489 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 DNMT3BQ9UBC3 853 aaKnown RBP16.91■□□□□ 0.3
HDAC7-224ENST00000488927 XIRP2A4UGR9 3374 aa16.91■□□□□ 0.3
HDAC7-224ENST00000488927 PRUNE2Q8WUY3 3088 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 SLC38A8A6NNN8 435 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 O00370 1275 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 RTN3O95197 1032 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-224ENST00000488927 RHOP08100 348 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 GNA15P30679 374 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 BCAT1P54687 386 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 FIGNQ5HY92 759 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 CLEC20AQ6ZU45 233 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.9■□□□□ 0.3
HDAC7-224ENST00000488927 GIPC2Q8TF65 315 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 MYRFLQ96LU7 910 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 PHF7Q9BWX1 381 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-224ENST00000488927 EDEM3Q9BZQ6 932 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 UBXN6Q9BZV1 441 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 GPR88Q9GZN0 384 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 RBSNQ9H1K0 784 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 NLRC4Q9NPP4 1024 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 COMMD8Q9NX08 183 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.9■□□□□ 0.3
HDAC7-224ENST00000488927 PRKAG3Q9UGI9 489 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 AJAP1Q9UKB5 411 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-224ENST00000488927 TSPAN16Q9UKR8 245 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 MYO6Q9UM54 1294 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.9■□□□□ 0.3
HDAC7-224ENST00000488927 USTQ9Y2C2 406 aa16.9■□□□□ 0.3
HDAC7-224ENST00000488927 EPHB6O15197 1021 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 CYP26A1O43174 497 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 CCDC172P0C7W6 258 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 SETSIPP0DME0 302 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 FSHRP23945 695 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 CDC25CP30307 473 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms