RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 CHAMP1Q96JM3 812 aa13.17□□□□□ -0.3
TTC3-221ENST00000488522 PI4K2AQ9BTU6 479 aa13.17□□□□□ -0.3
TTC3-221ENST00000488522 OLFML3Q9NRN5 406 aa13.17□□□□□ -0.3
TTC3-221ENST00000488522 CHMP5Q9NZZ3 219 aa13.17□□□□□ -0.3
TTC3-221ENST00000488522 STK17AQ9UEE5 414 aa13.17□□□□□ -0.3
TTC3-221ENST00000488522 ITGA11Q9UKX5 1188 aa13.17□□□□□ -0.3
TTC3-221ENST00000488522 ASPMQ8IZT6 3477 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 ATRXP46100 2492 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 PKD1L2Q7Z442 2459 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 PLXND1Q9Y4D7 1925 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
TTC3-221ENST00000488522 GARTP22102 1010 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 POLR2BP30876 1174 aaKnown RBP13.16□□□□□ -0.3
TTC3-221ENST00000488522 MAGEA11P43364 429 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 MYL7Q01449 175 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 CEBPZQ03701 1054 aaKnown RBP13.16□□□□□ -0.3
TTC3-221ENST00000488522 DHX8Q14562 1220 aaKnown RBP13.16□□□□□ -0.3
TTC3-221ENST00000488522 DDR2Q16832 855 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 L1TD1Q5T7N2 865 aaKnown RBP13.16□□□□□ -0.3
TTC3-221ENST00000488522 PMS2CLQ68D20 193 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 RNF43Q68DV7 783 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 ATL3Q6DD88 541 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 FAM171BQ6P995 826 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 SFR1Q86XK3 245 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 TOP6BLQ8N6T0 577 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 KRI1Q8N9T8 703 aaKnown RBP13.16□□□□□ -0.3
TTC3-221ENST00000488522 STKLD1Q8NE28 680 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 SLC22A12Q96S37 553 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 EDEM2Q9BV94 578 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 IKZF4Q9H2S9 585 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 SMOC1Q9H4F8 434 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 ZHX3Q9H4I2 956 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 POLR3BQ9NW08 1133 aaPredicted RBP13.16□□□□□ -0.3
TTC3-221ENST00000488522 DUS2Q9NX74 493 aaKnown RBP13.16□□□□□ -0.3
TTC3-221ENST00000488522 DDX43Q9NXZ2 648 aaKnown RBP13.16□□□□□ -0.3
TTC3-221ENST00000488522 ARHGAP26Q9UNA1 814 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 WASF3Q9UPY6 502 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 CLIC4Q9Y696 253 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 CACNA1GO43497 2377 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 ABCA7Q8IZY2 2146 aa13.16□□□□□ -0.3
TTC3-221ENST00000488522 SPEGQ15772 3267 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 TRAV19A0A0A6YYK7 116 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 LNP1A1A4G5 178 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 HUS1O60921 280 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.3
TTC3-221ENST00000488522 ITGB3P05106 788 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 PROS1P07225 676 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 CHRM1P11229 460 aaPredicted RBP13.15□□□□□ -0.3
TTC3-221ENST00000488522 CYP2F1P24903 491 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 PCSK1P29120 753 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 IFNAR2P48551 515 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 LHX1P48742 406 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 CDR1P51861 262 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 DNM1Q05193 864 aaKnown RBP13.15□□□□□ -0.3
TTC3-221ENST00000488522 GAB4Q2WGN9 574 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 SDHAF4Q5VUM1 108 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 TCEAL6Q6IPX3 200 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 DPH6Q7L8W6 267 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 OSTM1Q86WC4 334 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 TCEAL3Q969E4 200 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 DNAJC19Q96DA6 116 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 SPATA17Q96L03 361 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 GTF3C4Q9UKN8 822 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 CFAP45Q9UL16 551 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 MAGED2Q9UNF1 606 aaPredicted RBP13.15□□□□□ -0.3
TTC3-221ENST00000488522 EXOC7Q9UPT5 735 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 WNT6Q9Y6F9 365 aa13.15□□□□□ -0.3
TTC3-221ENST00000488522 TNRC6BQ9UPQ9 1833 aaKnown RBP13.15□□□□□ -0.3
TTC3-221ENST00000488522 AKAP13Q12802 2813 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 FRMD3A2A2Y4 597 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 NFATC1O95644 943 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 CAVIN2O95810 425 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 OLFM2O95897 454 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 CKMP06732 381 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 GAP43P17677 238 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 OPRD1P41143 372 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 NASPP49321 788 aaPredicted RBP13.14□□□□□ -0.31
TTC3-221ENST00000488522 PDE6CP51160 858 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 KRT85P78386 507 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 KCNA1Q09470 495 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 NR1H3Q13133 447 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 ALCAMQ13740 583 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 STK38Q15208 465 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 PSAPL1Q6NUJ1 521 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 VSTM1Q6UX27 236 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 ADGRF2Q8IZF7 708 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 FSIP1Q8NA03 581 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 OLIG1Q8TAK6 271 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 SH3RF2Q8TEC5 729 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 USP33Q8TEY7 942 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 CACTINQ8WUQ7 758 aaKnown RBP13.14□□□□□ -0.31
TTC3-221ENST00000488522 CNOT6LQ96LI5 555 aaKnown RBP13.14□□□□□ -0.31
TTC3-221ENST00000488522 ACCSQ96QU6 501 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 TTLL2Q9BWV7 592 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 TMEM121BQ9BXQ6 578 aaPredicted RBP13.14□□□□□ -0.31
TTC3-221ENST00000488522 RBAKQ9NYW8 714 aaPredicted RBP13.14□□□□□ -0.31
TTC3-221ENST00000488522 SIX4Q9UIU6 781 aa13.14□□□□□ -0.31
TTC3-221ENST00000488522 AGAP1Q9UPQ3 857 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms