RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 SYNE4Q8N205 404 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 OTULINQ96BN8 352 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 DCPSQ96C86 337 aaKnown RBP8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 KIF12Q96FN5 646 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 MADDQ8WXG6 1647 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 ZSCAN5CA6NGD5 496 aaPredicted RBP8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 RALBP11234 206 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 MCL1Q07820 350 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 XRCC4Q13426 336 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 DENND1BQ6P3S1 775 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 TSEN2Q8NCE0 465 aaKnown RBP8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 EXD1Q8NHP7 514 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 SUPT3HB4E1H0 165 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 BLVRAP53004 296 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 MMRN1Q13201 1228 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 TTMPQ5BVD1 217 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 AGAP9Q5VTM2 703 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 GPAT2Q6NUI2 795 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 HEATR4Q86WZ0 1026 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 ATPAF2Q8N5M1 289 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 OXNAD1Q96HP4 312 aaPredicted RBP8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 AGPAT3Q9NRZ7 376 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 UBAP1Q9NZ09 502 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 DMPKQ09013 629 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 LINC00523Q86TU6 105 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 PLEKHA8Q96JA3 519 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 FAM84BQ96KN1 310 aaPredicted RBP8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 EHD4Q9H223 541 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 RNF146Q9NTX7 359 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 TUBGCP4Q9UGJ1 667 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 TOB1P50616 345 aaPredicted RBP8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 ZNF571Q7Z3V5 609 aaPredicted RBP8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 CHORDC1Q9UHD1 332 aaPredicted RBP8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 SFMBT1Q9UHJ3 866 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 SHOC2Q9UQ13 582 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 COMMD3-BMI1R4GMX3 469 aa8.57□□□□□ -1.04
MCF2L2-212ENST00000488149 DNALI1O14645 258 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 PSMG1O95456 288 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 IFI35P80217 286 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 RBP5P82980 135 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 ITGB3BPQ13352 177 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 MTFR1Q15390 333 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 KIZQ2M2Z5 673 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 SH3TC2Q8TF17 1288 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 OMA1Q96E52 524 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 ASIC4Q96FT7 647 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 AFF4Q9UHB7 1163 aaKnown RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 RPS6KL1Q9Y6S9 549 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 A0A087WXM4 84 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 FAM95CA0A1B0GW59 222 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 EEF2KO00418 725 aaKnown RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 FASP25445 335 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 RAD23AP54725 363 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 CLVS1Q8IUQ0 354 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 PRCCQ92733 491 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 JPH1Q9HDC5 661 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 OSGEPQ9NPF4 335 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 HOXC10Q9NYD6 342 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 LMTK3Q96Q04 1460 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 CFAP99D6REC4 459 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 SNX3O60493 162 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 TGM2P21980 687 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 TTKP33981 857 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 SLC45A4Q5BKX6 768 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 XKR3Q5GH77 459 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 VPS37AQ8NEZ2 397 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 FAM81AQ8TBF8 368 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 TFB1MQ8WVM0 346 aaKnown RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 SEMA6BQ9H3T3 888 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 EPB41L4AQ9HCS5 686 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 LRFN2Q9ULH4 789 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 IQSEC2Q5JU85 1478 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 SDR42E2A6NKP2 422 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 PDZK1P1A8MUH7 402 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 LIN7AO14910 233 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 UNC5CO95185 931 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 HIST1H2AGP0C0S8 130 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 HIST1H2ADP20671 130 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 GSTA3Q16772 222 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 BTBD8Q5XKL5 378 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 SNRNP48Q6IEG0 339 aaKnown RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 MREGQ8N565 214 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 DIS3LQ8TF46 1054 aaKnown RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 HIST1H2AHQ96KK5 128 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 HIST1H2AJQ99878 128 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 H2AFJQ9BTM1 129 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 THUMPD3Q9BV44 507 aaKnown RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 H2AFY2Q9P0M6 372 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 ITGA4P13612 1032 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 GTF2H1P32780 548 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 TRIM25Q14258 630 aaKnown RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 TWF2Q6IBS0 349 aaKnown RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 SPON2Q9BUD6 331 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 NIF3L1Q9GZT8 377 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 DMAP1Q9NPF5 467 aaPredicted RBP8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 CD274Q9NZQ7 290 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 RABGEF1Q9UJ41 708 aa8.56□□□□□ -1.04
MCF2L2-212ENST00000488149 TSR3Q9UJK0 312 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms