RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 UNC80Q8N2C7 3258 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 GTPBP10A4D1E9 387 aaKnown RBP18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 LRRC10BA6NIK2 292 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 SLC38A8A6NNN8 435 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 TULP2O00295 520 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 XYLBO75191 536 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 AP1G2O75843 785 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 KRT5P13647 590 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 CD19P15391 556 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 PTPN2P17706 415 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 FSHRP23945 695 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 BRD2P25440 801 aaKnown RBP18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 TUFMP49411 452 aaKnown RBP18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 EPHB3P54753 998 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 GCNT1Q02742 428 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 UBXN1Q04323 297 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 ZP2Q05996 745 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 IFRD2Q12894 506 aaPredicted RBP18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 AAK1Q2M2I8 961 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 PABPC1LQ4VXU2 614 aaKnown RBP18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 PRSS36Q5K4E3 855 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 GAREM2Q75VX8 874 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 GPRIN1Q7Z2K8 1008 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 GAS2L3Q86XJ1 694 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 SHKBP1Q8TBC3 707 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 C2orf15Q8WU43 125 aaKnown RBP18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 TNIP3Q96KP6 325 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 ZNF512Q96ME7 567 aaPredicted RBP18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 ZSWIM3Q96MP5 696 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 PHF7Q9BWX1 381 aaPredicted RBP18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 GANQ9H2C0 597 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 IL21Q9HBE4 155 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 MAFFQ9ULX9 164 aa18.21■□□□□ 0.51
SHROOM1-205ENST00000488072 TBXAS1P24557 533 aaPredicted RBP18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 USP8P40818 1118 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 PGFP49763 221 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 ZNF132P52740 706 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 MAP3K7CLP57077 242 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 CYP4F8P98187 520 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 SMARCB1Q12824 385 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 TEAD2Q15562 447 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 ELMSAN1Q6PJG2 1045 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 TMEM150AQ86TG1 271 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 TTC30AQ86WT1 665 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 UBA3Q8TBC4 463 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 KHSRPQ92945 711 aaKnown RBP eCLIP18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 PSMG2Q969U7 264 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 MCRS1Q96EZ8 462 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 FUBP3Q96I24 572 aaKnown RBP eCLIP18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 HNRNPABQ99729 332 aaKnown RBP18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 ABCB6Q9NP58 842 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 RTN4Q9NQC3 1192 aaKnown RBP18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 FAM207AQ9NSI2 230 aaPredicted RBP18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 C5orf42Q9H799 3197 aa18.2■□□□□ 0.5
SHROOM1-205ENST00000488072 A0A1W2PRU2 124 aa18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 FOXN3O00409 490 aaPredicted RBP18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 TADA3O75528 432 aa18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 GBP2P32456 591 aaPredicted RBP18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 MAGEA11P43364 429 aa18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 ZNF445P59923 1031 aa18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 FANCCQ00597 558 aa18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 MAPRE1Q15691 268 aaKnown RBP18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 GOLGA7BQ2TAP0 167 aa18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 PUS10Q3MIT2 529 aaKnown RBP18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 CLEC20AQ6ZU45 233 aa18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 SCAMP5Q8TAC9 235 aa18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 RSAD2Q8WXG1 361 aa18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 FAXDC2Q96IV6 333 aa18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 NAA15Q9BXJ9 866 aaKnown RBP18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 SMOC2Q9H3U7 446 aa18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 MRPS23Q9Y3D9 190 aaKnown RBP18.19■□□□□ 0.5
SHROOM1-205ENST00000488072 LOC730098B7Z3J9 87 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 HHLA1C9JL84 531 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 CYP26A1O43174 497 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 ASGR2P07307 311 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 POU2F2P09086 479 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 GABRR2P28476 465 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 RAPGEF1Q13905 1077 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 DRAP1Q14919 205 aaPredicted RBP18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 FKBP15Q5T1M5 1219 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 VSTM1Q6UX27 236 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 ADHFE1Q8IWW8 467 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 NPAS3Q8IXF0 933 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 FGF13Q92913 245 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 PCMTD1Q96MG8 357 aaPredicted RBP18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 NECTIN4Q96NY8 510 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 RPP25Q9BUL9 199 aaKnown RBP18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 RBSNQ9H1K0 784 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 NLRC4Q9NPP4 1024 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 ASAH2Q9NR71 780 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 HSFX1Q9UBD0 423 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 TSPAN16Q9UKR8 245 aa18.18■□□□□ 0.5
SHROOM1-205ENST00000488072 C19orf67A6NJJ6 358 aa18.17■□□□□ 0.5
SHROOM1-205ENST00000488072 O00370 1275 aa18.17■□□□□ 0.5
SHROOM1-205ENST00000488072 AP5Z1O43299 807 aa18.17■□□□□ 0.5
SHROOM1-205ENST00000488072 GABBR2O75899 941 aa18.17■□□□□ 0.5
SHROOM1-205ENST00000488072 UCHL3P15374 230 aa18.17■□□□□ 0.5
SHROOM1-205ENST00000488072 EPHA5P54756 1037 aa18.17■□□□□ 0.5
SHROOM1-205ENST00000488072 MFAP3P55082 362 aa18.17■□□□□ 0.5
SHROOM1-205ENST00000488072 POLR2FP61218 127 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms