RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 DNAJB2P25686 324 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 ELF1P32519 619 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 PLA2G4AP47712 749 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 RPL10AP62906 217 aaKnown RBP11.68□□□□□ -0.54
HDLBP-242ENST00000488013 PLD1Q13393 1074 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 GPM6BQ13491 265 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 PTPN14Q15678 1187 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 GOLGA7BQ2TAP0 167 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 SLC39A12Q504Y0 691 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 PKDCCQ504Y2 493 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 CCDC122Q5T0U0 273 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 PPP1R26Q5T8A7 1209 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-242ENST00000488013 LIN9Q5TKA1 542 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 FAM109BQ6ICB4 259 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-242ENST00000488013 ZNF662Q6ZS27 426 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 H2AFVQ71UI9 128 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 TAS1R1Q7RTX1 841 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 PHF13Q86YI8 300 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-242ENST00000488013 FUKQ8N0W3 1084 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 SLC20A1Q8WUM9 679 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 MYLPFQ96A32 169 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 TRIM62Q9BVG3 475 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 VN1R3Q9BXE9 311 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 ISCUQ9H1K1 167 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 SYNCQ9H7C4 482 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 DMAP1Q9NPF5 467 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-242ENST00000488013 FAM49BQ9NUQ9 324 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 COMMD8Q9NX08 183 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 YBX2Q9Y2T7 364 aaKnown RBP11.68□□□□□ -0.54
HDLBP-242ENST00000488013 CDY1Q9Y6F8 540 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 ALPK3Q96L96 1907 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-242ENST00000488013 ANKRD62A6NC57 917 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 C2CD2LO14523 706 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 ATP2C2O75185 946 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 AP1G2O75843 785 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 ABLIM3O94929 683 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 FTLP02792 175 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-242ENST00000488013 PLEKP08567 350 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-242ENST00000488013 CCDC130P13994 396 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 ATF2P15336 505 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 MMP8P22894 467 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 OR1D2P34982 312 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 GPD2P43304 727 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 MAGEA1P43355 309 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 NOMO3P69849 1222 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 GFPT1Q06210 699 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-242ENST00000488013 KIF5AQ12840 1032 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 ORC1Q13415 861 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 IFI16Q16666 785 aaKnown RBP11.67□□□□□ -0.54
HDLBP-242ENST00000488013 IER5LQ5T953 404 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 PRPF38BQ5VTL8 546 aaKnown RBP11.67□□□□□ -0.54
HDLBP-242ENST00000488013 NAA35Q5VZE5 725 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 PRSS55Q6UWB4 352 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-242ENST00000488013 RAD9BQ6WBX8 426 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 CCDC149Q6ZUS6 474 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 KIAA1328Q86T90 577 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 FAM35AQ86V20 835 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 ERICH1Q86X53 443 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 HDAC7Q8WUI4 952 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 SLC35F5Q8WV83 523 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 CTNNBL1Q8WYA6 563 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-242ENST00000488013 KCTD13Q8WZ19 329 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 C8orf48Q96LL4 319 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 B3GNT5Q9BYG0 378 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 NKX2-4Q9H2Z4 354 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 CSNK1G1Q9HCP0 422 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 MRPL47Q9HD33 250 aaKnown RBP11.67□□□□□ -0.54
HDLBP-242ENST00000488013 ALG13Q9NP73 1137 aaKnown RBP11.67□□□□□ -0.54
HDLBP-242ENST00000488013 ACP6Q9NPH0 428 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 KRT82Q9NSB4 513 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 TMEM51Q9NW97 253 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 NME7Q9Y5B8 376 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 PCDHA13Q9Y5I0 950 aa11.67□□□□□ -0.54
HDLBP-242ENST00000488013 FSCN2O14926 492 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 TEX28O15482 410 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 FBXO21O94952 628 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 TMEM253P0C7T8 217 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 ADORA2BP29275 332 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 SCNN1AP37088 669 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 GRIK1P39086 918 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 PBX2P40425 430 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 RPL34P49207 117 aaKnown RBP11.66□□□□□ -0.54
HDLBP-242ENST00000488013 VAV2P52735 878 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 ARPP19P56211 112 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 GPC5P78333 572 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 ROR1Q01973 937 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 PDCLQ13371 301 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 DENND1BQ6P3S1 775 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 TMEM110Q86TL2 294 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 LRRTM3Q86VH5 581 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 C1orf131Q8NDD1 294 aaKnown RBP11.66□□□□□ -0.54
HDLBP-242ENST00000488013 SECISBP2LQ93073 1101 aaKnown RBP11.66□□□□□ -0.54
HDLBP-242ENST00000488013 C18orf8Q96DM3 657 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 PPP1R13BQ96KQ4 1090 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 SPATA17Q96L03 361 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 B3GALT6Q96L58 329 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 PCDHB18PQ96TA0 734 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 CDCA3Q99618 268 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-242ENST00000488013 CLSTN3Q9BQT9 956 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms