RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 CRTAC1Q9NQ79 661 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 EHD2Q9NZN4 543 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 NXF1Q9UBU9 619 aaKnown RBP13.3□□□□□ -0.28
SREBF1-215ENST00000487401 GMEB2Q9UKD1 530 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 COL4A3Q01955 1670 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 NOTCH4Q99466 2003 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 A8MXQ7 604 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 TRIM66O15016 1216 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
SREBF1-215ENST00000487401 CMA1P23946 247 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 PDE6CP51160 858 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 AP3M2P53677 418 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 MYL6P60660 151 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 FAM160A1Q05DH4 1040 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 PSMD2Q13200 908 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 BIRC3Q13489 604 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 KCNB1Q14721 858 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 Q6ZS52 159 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 ZNF516Q92618 1163 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 SYAP1Q96A49 352 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-215ENST00000487401 PCED1BQ96HM7 432 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 HPS4Q9NQG7 708 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 DUS2Q9NX74 493 aaKnown RBP13.29□□□□□ -0.28
SREBF1-215ENST00000487401 TRPM5Q9NZQ8 1165 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 USP25Q9UHP3 1055 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 RIF1Q5UIP0 2472 aaKnown RBP13.29□□□□□ -0.28
SREBF1-215ENST00000487401 CITO14578 2027 aa13.29□□□□□ -0.28
SREBF1-215ENST00000487401 A0A1B0GVL5 298 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 CHURC1-FNTBB4DL54 471 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 ACTN4O43707 911 aaKnown RBP13.28□□□□□ -0.28
SREBF1-215ENST00000487401 TADA3O75528 432 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 PAPSS2O95340 614 aaPredicted RBP13.28□□□□□ -0.28
SREBF1-215ENST00000487401 STAU1O95793 577 aaKnown RBP13.28□□□□□ -0.28
SREBF1-215ENST00000487401 ARSAP15289 507 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 HDCP19113 662 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 IFNAR2P48551 515 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 FNTBP49356 437 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 KRT85P78386 507 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 STK4Q13043 487 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 CCINQ13939 588 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 MTF1Q14872 753 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 KMT5BQ4FZB7 885 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 HEATR6Q6AI08 1181 aaKnown RBP13.28□□□□□ -0.28
SREBF1-215ENST00000487401 PRR23BQ6ZRT6 265 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 DENND5BQ6ZUT9 1274 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 ERMP1Q7Z2K6 904 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 LONP2Q86WA8 852 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 CPA6Q8N4T0 437 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 ARL14EPQ8N8R7 260 aaPredicted RBP13.28□□□□□ -0.28
SREBF1-215ENST00000487401 SH3RF2Q8TEC5 729 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 OSCP1Q8WVF1 389 aa13.28□□□□□ -0.28
SREBF1-215ENST00000487401 CCDC47Q96A33 483 aaKnown RBP13.28□□□□□ -0.28
SREBF1-215ENST00000487401 TRIP11Q15643 1979 aa13.27□□□□□ -0.28
SREBF1-215ENST00000487401 DOCK6Q96HP0 2047 aa13.27□□□□□ -0.28
SREBF1-215ENST00000487401 C2orf78A6NCI8 922 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 F8VP50 259 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 TRDMT1O14717 391 aaKnown RBP13.27□□□□□ -0.29
SREBF1-215ENST00000487401 KLRC4O43908 158 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 ATG13O75143 517 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 MYL1P05976 194 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 PFKFB1P16118 471 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 CNR2P34972 360 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 PPP3CCP48454 512 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 CASP4P49662 377 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 NR1H3Q13133 447 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 SIM2Q14190 667 aaPredicted RBP13.27□□□□□ -0.29
SREBF1-215ENST00000487401 LPAL2Q16609 132 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 ZNF699Q32M78 642 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 TMEM196Q5HYL7 178 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 WDR44Q5JSH3 913 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 TDRD10Q5VZ19 366 aaKnown RBP13.27□□□□□ -0.29
SREBF1-215ENST00000487401 ATP2A3Q93084 1043 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 RMDN1Q96DB5 314 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 C8orf48Q96LL4 319 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 SLC22A12Q96S37 553 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 ELOVL4Q9GZR5 314 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 ECT2Q9H8V3 914 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 GCNT4Q9P109 453 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 USP18Q9UMW8 372 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 WDR87Q6ZQQ6 2873 aa13.27□□□□□ -0.29
SREBF1-215ENST00000487401 OTOL1A6NHN0 477 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-215ENST00000487401 LRRIQ3A6PVS8 624 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-215ENST00000487401 K7ESF4 209 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 PDXKO00764 312 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 CALUO43852 315 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-215ENST00000487401 ATP8B3O60423 1300 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 KIF20AO95235 890 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 ABL1P00519 1130 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 P4HA1P13674 534 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 PFKLP17858 780 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 DRD1P21728 446 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 SDHBP21912 280 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 SYKP43405 635 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 GALK1P51570 392 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 USP46P62068 366 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 DMWDQ09019 674 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 NCOA4Q13772 614 aa13.26□□□□□ -0.29
SREBF1-215ENST00000487401 PUM1Q14671 1186 aaKnown RBP eCLIP13.26□□□□□ -0.29
SREBF1-215ENST00000487401 ZNF77Q15935 545 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms