RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 OBSL1O75147 1896 aa26.25■■□□□ 1.79
LIME1-206ENST00000487026 ARSAP15289 507 aa26.25■■□□□ 1.79
LIME1-206ENST00000487026 GNL1P36915 607 aaPredicted RBP26.25■■□□□ 1.79
LIME1-206ENST00000487026 MAGEA11P43364 429 aa26.25■■□□□ 1.79
LIME1-206ENST00000487026 SNRPFP62306 86 aaKnown RBP26.25■■□□□ 1.79
LIME1-206ENST00000487026 CYP27A1Q02318 531 aa26.25■■□□□ 1.79
LIME1-206ENST00000487026 RUNX3Q13761 415 aa26.25■■□□□ 1.79
LIME1-206ENST00000487026 LPAL2Q16609 132 aa26.25■■□□□ 1.79
LIME1-206ENST00000487026 KNOP1Q1ED39 458 aaKnown RBP26.25■■□□□ 1.79
LIME1-206ENST00000487026 BMT2Q1RMZ1 405 aa26.25■■□□□ 1.79
LIME1-206ENST00000487026 SNX25Q9H3E2 840 aa26.25■■□□□ 1.79
LIME1-206ENST00000487026 ZNF638Q14966 1978 aaKnown RBP26.25■■□□□ 1.79
LIME1-206ENST00000487026 SOBPA7XYQ1 873 aa26.24■■□□□ 1.79
LIME1-206ENST00000487026 CHURC1-FNTBB4DL54 471 aa26.24■■□□□ 1.79
LIME1-206ENST00000487026 KLRC4O43908 158 aa26.24■■□□□ 1.79
LIME1-206ENST00000487026 GRIK1P39086 918 aa26.24■■□□□ 1.79
LIME1-206ENST00000487026 FNTBP49356 437 aa26.24■■□□□ 1.79
LIME1-206ENST00000487026 CASP4P49662 377 aa26.24■■□□□ 1.79
LIME1-206ENST00000487026 CCINQ13939 588 aa26.24■■□□□ 1.79
LIME1-206ENST00000487026 WDR72Q3MJ13 1102 aa26.24■■□□□ 1.79
LIME1-206ENST00000487026 PAGE5Q96GU1 130 aa26.24■■□□□ 1.79
LIME1-206ENST00000487026 KIF9Q9HAQ2 790 aa26.24■■□□□ 1.79
LIME1-206ENST00000487026 ACTN4O43707 911 aaKnown RBP26.23■■□□□ 1.79
LIME1-206ENST00000487026 EXOC3O60645 756 aa26.23■■□□□ 1.79
LIME1-206ENST00000487026 SLFN14P0C7P3 912 aa26.23■■□□□ 1.79
LIME1-206ENST00000487026 MYL6P60660 151 aa26.23■■□□□ 1.79
LIME1-206ENST00000487026 STK4Q13043 487 aa26.23■■□□□ 1.79
LIME1-206ENST00000487026 MDH1BQ5I0G3 518 aa26.23■■□□□ 1.79
LIME1-206ENST00000487026 HEATR6Q6AI08 1181 aaKnown RBP26.23■■□□□ 1.79
LIME1-206ENST00000487026 CC2D1AQ6P1N0 951 aaPredicted RBP26.23■■□□□ 1.79
LIME1-206ENST00000487026 OR6B3Q8NGW1 331 aa26.23■■□□□ 1.79
LIME1-206ENST00000487026 PLEKHO2Q8TD55 490 aa26.23■■□□□ 1.79
LIME1-206ENST00000487026 CHFRQ96EP1 664 aa26.23■■□□□ 1.79
LIME1-206ENST00000487026 PCED1BQ96HM7 432 aa26.23■■□□□ 1.79
LIME1-206ENST00000487026 A0A1B0GVL5 298 aa26.22■■□□□ 1.79
LIME1-206ENST00000487026 C2orf78A6NCI8 922 aa26.22■■□□□ 1.79
LIME1-206ENST00000487026 K7ESF4 209 aa26.22■■□□□ 1.79
LIME1-206ENST00000487026 CKMP06732 381 aa26.22■■□□□ 1.79
LIME1-206ENST00000487026 USP46P62068 366 aa26.22■■□□□ 1.79
LIME1-206ENST00000487026 TNNC1P63316 161 aa26.22■■□□□ 1.79
LIME1-206ENST00000487026 TRPC3Q13507 836 aa26.22■■□□□ 1.79
LIME1-206ENST00000487026 ZNF268Q14587 947 aaPredicted RBP26.22■■□□□ 1.79
LIME1-206ENST00000487026 MAPRE1Q15691 268 aaKnown RBP26.22■■□□□ 1.79
LIME1-206ENST00000487026 VSTM1Q6UX27 236 aa26.22■■□□□ 1.79
LIME1-206ENST00000487026 C12orf56Q8IXR9 622 aa26.22■■□□□ 1.79
LIME1-206ENST00000487026 ARL14EPQ8N8R7 260 aaPredicted RBP26.22■■□□□ 1.79
LIME1-206ENST00000487026 MYCBPAPQ8TBZ2 947 aa26.22■■□□□ 1.79
LIME1-206ENST00000487026 DPEP3Q9H4B8 488 aa26.22■■□□□ 1.79
LIME1-206ENST00000487026 CGNQ9P2M7 1197 aaKnown RBP26.22■■□□□ 1.79
LIME1-206ENST00000487026 NXF1Q9UBU9 619 aaKnown RBP26.22■■□□□ 1.79
LIME1-206ENST00000487026 TRAV19A0A0A6YYK7 116 aa26.21■■□□□ 1.79
LIME1-206ENST00000487026 TACC1O75410 805 aa26.21■■□□□ 1.79
LIME1-206ENST00000487026 USP17L7P0C7H9 530 aa26.21■■□□□ 1.79
LIME1-206ENST00000487026 SRSF5Q13243 272 aaKnown RBP26.21■■□□□ 1.79
LIME1-206ENST00000487026 PKN3Q6P5Z2 889 aa26.21■■□□□ 1.79
LIME1-206ENST00000487026 FSIP1Q8NA03 581 aa26.21■■□□□ 1.79
LIME1-206ENST00000487026 ELMO3Q96BJ8 720 aa26.21■■□□□ 1.79
LIME1-206ENST00000487026 SPATA17Q96L03 361 aa26.21■■□□□ 1.79
LIME1-206ENST00000487026 FBRSL1Q9HCM7 1045 aaKnown RBP26.21■■□□□ 1.79
LIME1-206ENST00000487026 GCNT4Q9P109 453 aa26.21■■□□□ 1.79
LIME1-206ENST00000487026 PHACTR2O75167 634 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 PTPN1P18031 435 aaKnown RBP26.2■■□□□ 1.78
LIME1-206ENST00000487026 FAM160A1Q05DH4 1040 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 MTF1Q14872 753 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 KMT5BQ4FZB7 885 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 TMEM196Q5HYL7 178 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 NAIF1Q69YI7 327 aaPredicted RBP26.2■■□□□ 1.78
LIME1-206ENST00000487026 FSTL4Q6MZW2 842 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 PRR23BQ6ZRT6 265 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 SYNPOQ8N3V7 929 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 KIAA0895Q8NCT3 520 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 XYLT2Q9H1B5 865 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 EXOC1Q9NV70 894 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 DNAH14Q0VDD8 3507 aa26.2■■□□□ 1.78
LIME1-206ENST00000487026 CEP250Q9BV73 2442 aa26.19■■□□□ 1.78
LIME1-206ENST00000487026 HRO43593 1189 aa26.19■■□□□ 1.78
LIME1-206ENST00000487026 PFKFB1P16118 471 aa26.19■■□□□ 1.78
LIME1-206ENST00000487026 ANXA13P27216 316 aa26.19■■□□□ 1.78
LIME1-206ENST00000487026 CACNA2D1P54289 1103 aa26.19■■□□□ 1.78
LIME1-206ENST00000487026 GRSF1Q12849 480 aaKnown RBP eCLIP26.19■■□□□ 1.786e-6■■■■□ 20.5
LIME1-206ENST00000487026 ZNF77Q15935 545 aa26.19■■□□□ 1.78
LIME1-206ENST00000487026 DENND5BQ6ZUT9 1274 aa26.19■■□□□ 1.78
LIME1-206ENST00000487026 SECISBP2LQ93073 1101 aaKnown RBP26.19■■□□□ 1.78
LIME1-206ENST00000487026 DUS2Q9NX74 493 aaKnown RBP26.19■■□□□ 1.78
LIME1-206ENST00000487026 RAB23Q9ULC3 237 aa26.19■■□□□ 1.78
LIME1-206ENST00000487026 ZDHHC9Q9Y397 364 aa26.19■■□□□ 1.78
LIME1-206ENST00000487026 WNT6Q9Y6F9 365 aa26.19■■□□□ 1.78
LIME1-206ENST00000487026 LRRIQ3A6PVS8 624 aaPredicted RBP26.18■■□□□ 1.78
LIME1-206ENST00000487026 A8MXQ7 604 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 F8VP50 259 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 CLDN5O00501 218 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 TRDMT1O14717 391 aaKnown RBP26.18■■□□□ 1.78
LIME1-206ENST00000487026 PAPSS2O95340 614 aaPredicted RBP26.18■■□□□ 1.78
LIME1-206ENST00000487026 HDCP19113 662 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 GALK1P51570 392 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 CDH8P55286 799 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 BIRC3Q13489 604 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 KCNB1Q14721 858 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 PDGFRLQ15198 375 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 TDRD10Q5VZ19 366 aaKnown RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms