RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 PALM2Q8IXS6 379 aa23.59■■□□□ 1.37
CLN5-202ENST00000485938 TAB3Q8N5C8 712 aaPredicted RBP23.59■■□□□ 1.37
CLN5-202ENST00000485938 RSAD2Q8WXG1 361 aa23.59■■□□□ 1.37
CLN5-202ENST00000485938 BTBD10Q9BSF8 475 aa23.59■■□□□ 1.37
CLN5-202ENST00000485938 TSSK1BQ9BXA7 367 aa23.59■■□□□ 1.37
CLN5-202ENST00000485938 ALG13Q9NP73 1137 aaKnown RBP23.59■■□□□ 1.37
CLN5-202ENST00000485938 EIF4E1BA6NMX2 242 aaKnown RBP23.58■■□□□ 1.37
CLN5-202ENST00000485938 DHRS4L1P0CG22 281 aa23.58■■□□□ 1.37
CLN5-202ENST00000485938 HARSP12081 509 aaKnown RBP23.58■■□□□ 1.37
CLN5-202ENST00000485938 EIF4BP23588 611 aaKnown RBP23.58■■□□□ 1.37
CLN5-202ENST00000485938 PSMA2P25787 234 aa23.58■■□□□ 1.37
CLN5-202ENST00000485938 RFC1P35251 1148 aaPredicted RBP23.58■■□□□ 1.37
CLN5-202ENST00000485938 MYL6P60660 151 aa23.58■■□□□ 1.37
CLN5-202ENST00000485938 CDHR1Q96JP9 859 aa23.58■■□□□ 1.37
CLN5-202ENST00000485938 PCDHGC3Q9UN70 934 aa23.58■■□□□ 1.37
CLN5-202ENST00000485938 WNT10BO00744 389 aa23.58■■□□□ 1.36
CLN5-202ENST00000485938 DNAJC6O75061 913 aa23.58■■□□□ 1.36
CLN5-202ENST00000485938 LRCH4O75427 683 aa23.58■■□□□ 1.36
CLN5-202ENST00000485938 ACADSP16219 412 aa23.58■■□□□ 1.36
CLN5-202ENST00000485938 TSHRP16473 764 aa23.58■■□□□ 1.36
CLN5-202ENST00000485938 DSTYKQ6XUX3 929 aa23.58■■□□□ 1.36
CLN5-202ENST00000485938 UNC45BQ8IWX7 931 aa23.58■■□□□ 1.36
CLN5-202ENST00000485938 PDIK1LQ8N165 341 aa23.58■■□□□ 1.36
CLN5-202ENST00000485938 ZNF526Q8TF50 670 aaPredicted RBP23.58■■□□□ 1.36
CLN5-202ENST00000485938 TUBB6Q9BUF5 446 aa23.58■■□□□ 1.36
CLN5-202ENST00000485938 NIF3L1Q9GZT8 377 aa23.58■■□□□ 1.36
CLN5-202ENST00000485938 KCNK13Q9HB14 408 aa23.58■■□□□ 1.36
CLN5-202ENST00000485938 XPO7Q9UIA9 1087 aaKnown RBP23.58■■□□□ 1.36
CLN5-202ENST00000485938 PARP14Q460N5 1801 aa23.57■■□□□ 1.36
CLN5-202ENST00000485938 CFAP69A5D8W1 941 aa23.57■■□□□ 1.36
CLN5-202ENST00000485938 SPATA31C2B4DYI2 1134 aa23.57■■□□□ 1.36
CLN5-202ENST00000485938 STAM2O75886 525 aa23.57■■□□□ 1.36
CLN5-202ENST00000485938 KCNT1Q5JUK3 1230 aa23.57■■□□□ 1.36
CLN5-202ENST00000485938 CHSY1Q86X52 802 aa23.57■■□□□ 1.36
CLN5-202ENST00000485938 BRSK2Q8IWQ3 736 aa23.57■■□□□ 1.36
CLN5-202ENST00000485938 LMNTD2Q8IXW0 634 aa23.57■■□□□ 1.36
CLN5-202ENST00000485938 CFAP61Q8NHU2 1237 aa23.57■■□□□ 1.36
CLN5-202ENST00000485938 DNAJC9Q8WXX5 260 aa23.57■■□□□ 1.36
CLN5-202ENST00000485938 SKA1Q96BD8 255 aa23.57■■□□□ 1.36
CLN5-202ENST00000485938 MT-ND3P03897 115 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 KRT7P08729 469 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 KDELR1P24390 212 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 TNFSF9P41273 254 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 ETV4P43268 484 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 NEK3P51956 506 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 ARFIP2P53365 341 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 AP3M2P53677 418 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 WDR49Q8IV35 697 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 ARMC2Q8NEN0 867 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 NSL1Q96IY1 281 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 CYTH2Q99418 400 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 MTMR12Q9C0I1 747 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 GINM1Q9NU53 330 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 GSC2O15499 205 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 LPXNO60711 386 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 OATP04181 439 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 TSNAXIP1Q2TAA8 658 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 IGDCC3Q8IVU1 814 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 KIAA0319LQ8IZA0 1049 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 JOSD2Q8TAC2 188 aa23.56■■□□□ 1.36
CLN5-202ENST00000485938 ZNF277Q9NRM2 450 aaPredicted RBP23.56■■□□□ 1.36
CLN5-202ENST00000485938 MTO1Q9Y2Z2 717 aaKnown RBP23.56■■□□□ 1.36
CLN5-202ENST00000485938 MAFBQ9Y5Q3 323 aaPredicted RBP23.56■■□□□ 1.36
CLN5-202ENST00000485938 SMAPO00193 183 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 TGDSO95455 350 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 SERPINB3P29508 390 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 IRX1P78414 480 aaPredicted RBP23.55■■□□□ 1.36
CLN5-202ENST00000485938 CDK16Q00536 496 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 PRKD1Q15139 912 aaPredicted RBP23.55■■□□□ 1.36
CLN5-202ENST00000485938 NAIF1Q69YI7 327 aaPredicted RBP23.55■■□□□ 1.36
CLN5-202ENST00000485938 SNRNP48Q6IEG0 339 aaKnown RBP23.55■■□□□ 1.36
CLN5-202ENST00000485938 APBB1IPQ7Z5R6 666 aaPredicted RBP23.55■■□□□ 1.36
CLN5-202ENST00000485938 THNSL1Q8IYQ7 743 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 PRR11Q96HE9 360 aaPredicted RBP23.55■■□□□ 1.36
CLN5-202ENST00000485938 SERAC1Q96JX3 654 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 TEPSINQ96N21 525 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 TMEM120AQ9BXJ8 343 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 TMEM134Q9H6X4 195 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 STOML1Q9UBI4 398 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 STRIP2Q9ULQ0 834 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 CHMP2BQ9UQN3 213 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 SIGLEC16A6NMB1 481 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 TTLL13PA6NNM8 815 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 FAM189A1O60320 539 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 ATG7O95352 703 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 CD48P09326 243 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 DLDP09622 509 aaKnown RBP23.55■■□□□ 1.36
CLN5-202ENST00000485938 MRPS35P82673 323 aaKnown RBP23.55■■□□□ 1.36
CLN5-202ENST00000485938 SP2Q02086 613 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 PTPN20Q4JDL3 420 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 DENND1BQ6P3S1 775 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 SH2D5Q6ZV89 423 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 FAM71DQ8N9W8 422 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 REPS2Q8NFH8 660 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 APOPT1Q96IL0 206 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 ZNF302Q9NR11 478 aa23.55■■□□□ 1.36
CLN5-202ENST00000485938 FBXO6Q9NRD1 293 aaPredicted RBP23.55■■□□□ 1.36
CLN5-202ENST00000485938 DPPA5A6NC42 116 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 ABLIM1O14639 778 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 PPP1R12AO14974 1030 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms