RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
TRA2B-213ENST00000485530 FBXW11Q9UKB1 542 aa13.02□□□□□ -0.33
TRA2B-213ENST00000485530 TPM2P07951 284 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 CLCN1P35523 988 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 MFAP3P55082 362 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 TPM4P67936 248 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 DRAP1Q14919 205 aaPredicted RBP13.01□□□□□ -0.33
TRA2B-213ENST00000485530 ANKRD54Q6NXT1 300 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 TMEM270Q6UE05 265 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 PPFIBP1Q86W92 1011 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 DCP1BQ8IZD4 617 aaKnown RBP13.01□□□□□ -0.33
TRA2B-213ENST00000485530 SHC3Q92529 594 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 JAKMIP2Q96AA8 810 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 ZNF707Q96C28 371 aaPredicted RBP13.01□□□□□ -0.33
TRA2B-213ENST00000485530 APOL5Q9BWW9 433 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 NT5C1AQ9BXI3 368 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 CYP4F11Q9HBI6 524 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 MAN1C1Q9NR34 630 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 PCDHB4Q9Y5E5 795 aa13.01□□□□□ -0.33
TRA2B-213ENST00000485530 A0A1W2PQC6 194 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 ZMYND10O75800 440 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 BEST1O76090 585 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 PAPLNO95428 1278 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 CFHP08603 1231 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 HAPLN1P10915 354 aaPredicted RBP13□□□□□ -0.33
TRA2B-213ENST00000485530 CCDC130P13994 396 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 BDNFP23560 247 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 GPR15P49685 360 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 POLR2FP61218 127 aaKnown RBP13□□□□□ -0.33
TRA2B-213ENST00000485530 TSPY1Q01534 308 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 FILIP1LQ4L180 1135 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 PPP1R26Q5T8A7 1209 aaPredicted RBP13□□□□□ -0.33
TRA2B-213ENST00000485530 SDHAF4Q5VUM1 108 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 FAM71AQ8IYT1 594 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 TMEM105Q8N8V8 129 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 SLC7A14Q8TBB6 771 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 HDAC7Q8WUI4 952 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 MYLPFQ96A32 169 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 CYFIP2Q96F07 1278 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 HEXIM2Q96MH2 286 aaKnown RBP13□□□□□ -0.33
TRA2B-213ENST00000485530 ANP32EQ9BTT0 268 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 STK33Q9BYT3 514 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 ZNF518BQ9C0D4 1074 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 PLEKHA4Q9H4M7 779 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 FAM124BQ9H5Z6 455 aaPredicted RBP13□□□□□ -0.33
TRA2B-213ENST00000485530 NLRC4Q9NPP4 1024 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 FAM49BQ9NUQ9 324 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 ABI2Q9NYB9 513 aaPredicted RBP13□□□□□ -0.33
TRA2B-213ENST00000485530 CEP72Q9P209 647 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 PCDHB5Q9Y5E4 795 aa13□□□□□ -0.33
TRA2B-213ENST00000485530 CCDC195A0A1B0GUA6 201 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 NRG2O14511 850 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-213ENST00000485530 CYP26A1O43174 497 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 C8AP07357 584 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 ATF6P18850 670 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 SP100P23497 879 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-213ENST00000485530 JAM2P57087 298 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 CYP27A1Q02318 531 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 NFE2Q16621 373 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-213ENST00000485530 DDR2Q16832 855 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 UVSSAQ2YD98 709 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 SARM1Q6SZW1 724 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 TMC5Q6UXY8 1006 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 ENOSF1Q7L5Y1 443 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 RBBP8NLQ8NC74 664 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-213ENST00000485530 STKLD1Q8NE28 680 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 ZMIZ2Q8NF64 920 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 SLC2A14Q8TDB8 520 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 GPR152Q8TDT2 470 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 BAP1Q92560 729 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 TNIP3Q96KP6 325 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 KCNK16Q96T55 309 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 HNRNPABQ99729 332 aaKnown RBP12.99□□□□□ -0.33
TRA2B-213ENST00000485530 TTYH3Q9C0H2 523 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 MAFFQ9ULX9 164 aa12.99□□□□□ -0.33
TRA2B-213ENST00000485530 DMXL1Q9Y485 3027 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 FSD2A1L4K1 749 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 GABBR2O75899 941 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 PAEPP09466 180 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 KRT5P13647 590 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 SMARCB1Q12824 385 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 RAPGEF1Q13905 1077 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 CFAP221Q4G0U5 840 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 POTEHQ6S545 545 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 SPATA2LQ8IUW3 424 aaPredicted RBP12.98□□□□□ -0.33
TRA2B-213ENST00000485530 TTC39CQ8N584 583 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 NEK11Q8NG66 645 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 SPPL2BQ8TCT7 592 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 CASP10Q92851 521 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 NKD2Q969F2 451 aaPredicted RBP12.98□□□□□ -0.33
TRA2B-213ENST00000485530 PCMTD1Q96MG8 357 aaPredicted RBP12.98□□□□□ -0.33
TRA2B-213ENST00000485530 SMOQ99835 787 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 ABCB6Q9NP58 842 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 HCFC1R1Q9NWW0 138 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 HSFX1Q9UBD0 423 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 INSL5Q9Y5Q6 135 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 ZNF292O60281 2723 aa12.98□□□□□ -0.33
TRA2B-213ENST00000485530 WDR87Q6ZQQ6 2873 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 F8VZ95 297 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms