RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 TRAV19A0A0A6YYK7 116 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.59■□□□□ 0.89
COL27A1-205ENST00000485397 C2orf78A6NCI8 922 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 CKMP06732 381 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 USP17L7P0C7H9 530 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 MAGEA11P43364 429 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 ASIC1P78348 528 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 AMPD2Q01433 879 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 C4orf50Q6ZRC1 276 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 RDH13Q8NBN7 331 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 OSCP1Q8WVF1 389 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 P2RY13Q9BPV8 354 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 LRRC27Q9C0I9 530 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 ECT2Q9H8V3 914 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 DUS2Q9NX74 493 aaKnown RBP20.59■□□□□ 0.89
COL27A1-205ENST00000485397 MAGEC2Q9UBF1 373 aaPredicted RBP20.59■□□□□ 0.89
COL27A1-205ENST00000485397 SLC8A2Q9UPR5 921 aa20.59■□□□□ 0.89
COL27A1-205ENST00000485397 K7ELQ4 463 aaPredicted RBP20.58■□□□□ 0.89
COL27A1-205ENST00000485397 TGFB1I1O43294 461 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 GDF9O60383 454 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 ATG13O75143 517 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 PPP6R2O75170 966 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 BDNFP23560 247 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 USP4Q13107 963 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 EPM2AIP1Q7L775 607 aaPredicted RBP20.58■□□□□ 0.89
COL27A1-205ENST00000485397 TRAPPC11Q7Z392 1133 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 WDR49Q8IV35 697 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 CPA6Q8N4T0 437 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 ZNF507Q8TCN5 953 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 NETO1Q8TDF5 533 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 SH3RF2Q8TEC5 729 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 MMS19Q96T76 1030 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 NME7Q9Y5B8 376 aa20.58■□□□□ 0.89
COL27A1-205ENST00000485397 SDK1Q7Z5N4 2213 aa20.58■□□□□ 0.88
COL27A1-205ENST00000485397 SLC30A4O14863 429 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 AXIN1O15169 862 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 CLIC2O15247 247 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 EIF3DO15371 548 aaKnown RBP eCLIP20.57■□□□□ 0.88
COL27A1-205ENST00000485397 CST3P01034 146 aaPredicted RBP20.57■□□□□ 0.88
COL27A1-205ENST00000485397 DRD1P21728 446 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 WARSP23381 471 aaKnown RBP20.57■□□□□ 0.88
COL27A1-205ENST00000485397 GRIK1P39086 918 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 IFNAR2P48551 515 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 USP46P62068 366 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 EML3Q32P44 896 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 FAM26FQ5R3K3 315 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 FOXD4L5Q5VV16 416 aaPredicted RBP20.57■□□□□ 0.88
COL27A1-205ENST00000485397 SHC4Q6S5L8 630 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 FSIP1Q8NA03 581 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 GAB3Q8WWW8 586 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 FOXD4L4Q8WXT5 416 aaPredicted RBP20.57■□□□□ 0.88
COL27A1-205ENST00000485397 EZH1Q92800 747 aaPredicted RBP20.57■□□□□ 0.88
COL27A1-205ENST00000485397 ZNF396Q96N95 335 aaPredicted RBP20.57■□□□□ 0.88
COL27A1-205ENST00000485397 MRPL45Q9BRJ2 306 aaKnown RBP20.57■□□□□ 0.88
COL27A1-205ENST00000485397 LINC00597Q9H2U6 94 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 CUEDC2Q9H467 287 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 KIAA1586Q9HCI6 787 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 AGPAT3Q9NRZ7 376 aa20.57■□□□□ 0.88
COL27A1-205ENST00000485397 RPP40O75818 363 aaKnown RBP20.56■□□□□ 0.88
COL27A1-205ENST00000485397 DLATP10515 647 aaKnown RBP20.56■□□□□ 0.88
COL27A1-205ENST00000485397 HDCP19113 662 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 CASP1P29466 404 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 AMPD3Q01432 767 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 CYP27A1Q02318 531 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 KCNB1Q14721 858 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 SNRNP35Q16560 246 aaKnown RBP20.56■□□□□ 0.88
COL27A1-205ENST00000485397 VSTM1Q6UX27 236 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 KBTBD6Q86V97 674 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 NELFCDQ8IXH7 590 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 IQUBQ8NA54 791 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 CD101Q93033 1021 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 PCED1BQ96HM7 432 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 SPATA17Q96L03 361 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 HHIPQ96QV1 700 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 C7orf25Q9BPX7 421 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 ARRDC1-AS1Q9H2J1 176 aa20.56■□□□□ 0.88
COL27A1-205ENST00000485397 CCDC163A0A0D9SF12 145 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 CUTAO60888 179 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 TNNI1P19237 187 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 CYP2J2P51589 502 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 ZXDBP98169 803 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 MAPRE1Q15691 268 aaKnown RBP20.55■□□□□ 0.88
COL27A1-205ENST00000485397 CCDC6Q16204 474 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 MDH1BQ5I0G3 518 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 CNNM4Q6P4Q7 775 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 DENND5BQ6ZUT9 1274 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 CACNA2D4Q7Z3S7 1137 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 RPLP0P6Q8NHW5 317 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 MYCBPAPQ8TBZ2 947 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 SCFD1Q8WVM8 642 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 ATP2A3Q93084 1043 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 CCDC127Q96BQ5 260 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 BACH2Q9BYV9 841 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 ARHGAP26Q9UNA1 814 aa20.55■□□□□ 0.88
COL27A1-205ENST00000485397 RALGAPA1Q6GYQ0 2036 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 YEATS4O95619 227 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 CCDC192P0DO97 292 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 GNL1P36915 607 aaPredicted RBP20.54■□□□□ 0.88
COL27A1-205ENST00000485397 CYP24A1Q07973 514 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 PSMD6Q15008 389 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms