RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 COL9A2Q14055 689 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-206ENST00000483030 POSTNQ15063 836 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 ZNF77Q15935 545 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 CCDC142Q17RM4 750 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 INTS6LQ5JSJ4 861 aaKnown RBP7.93□□□□□ -1.14
CSDE1-206ENST00000483030 PMS2CLQ68D20 193 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 SCARA3Q6AZY7 606 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 ANO7Q6IWH7 933 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 ZNF720Q7Z2F6 126 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 CYP2U1Q7Z449 544 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 C11orf74Q86VG3 221 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 OSTM1Q86WC4 334 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 TTC30AQ86WT1 665 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 SPATA2LQ8IUW3 424 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-206ENST00000483030 SCN4BQ8IWT1 228 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 RASSF8Q8NHQ8 419 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 CCDC26Q8TAB7 109 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 SH3RF2Q8TEC5 729 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 USP33Q8TEY7 942 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 LEO1Q8WVC0 666 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-206ENST00000483030 PIGKQ92643 395 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 RAD54LQ92698 747 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 TRMT2BQ96GJ1 504 aaKnown RBP7.93□□□□□ -1.14
CSDE1-206ENST00000483030 FAM84AQ96KN4 292 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 MYRFLQ96LU7 910 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 AK8Q96MA6 479 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 KIF2CQ99661 725 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 FAM213AQ9BRX8 229 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 TMEM206Q9H813 350 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 ABCB6Q9NP58 842 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 SCUBE2Q9NQ36 999 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 GCNT4Q9P109 453 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 L1RE1Q9UN81 338 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 KIF3AQ9Y496 699 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 CITO14578 2027 aa7.93□□□□□ -1.14
CSDE1-206ENST00000483030 RALGAPA1Q6GYQ0 2036 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 H3BQV1 296 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 HCRTO43612 131 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 ITGB3P05106 788 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 HOXB3P14651 431 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-206ENST00000483030 CSRP1P21291 193 aaKnown RBP7.92□□□□□ -1.14
CSDE1-206ENST00000483030 DDIT3P35638 169 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 OPRD1P41143 372 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 MYL7Q01449 175 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 GRIN1Q05586 938 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 KCNA1Q09470 495 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 USP4Q13107 963 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 KCNB1Q14721 858 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 CRY1Q16526 586 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 DYMQ7RTS9 669 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 RASSF3Q86WH2 238 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 SFR1Q86XK3 245 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 NT5DC4Q86YG4 428 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 TMEM86AQ8N2M4 240 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 CSGALNACT2Q8N6G5 542 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 C1orf127Q8N9H9 656 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 KRI1Q8N9T8 703 aaKnown RBP7.92□□□□□ -1.14
CSDE1-206ENST00000483030 FSIP1Q8NA03 581 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 ZSWIM2Q8NEG5 633 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 DEFB124Q8NES8 71 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 MDGA1Q8NFP4 955 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 CACTINQ8WUQ7 758 aaKnown RBP7.92□□□□□ -1.14
CSDE1-206ENST00000483030 RLN3Q8WXF3 142 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 CNOT6LQ96LI5 555 aaKnown RBP7.92□□□□□ -1.14
CSDE1-206ENST00000483030 PKMYT1Q99640 499 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 SCNM1Q9BWG6 230 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 TMEM121BQ9BXQ6 578 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-206ENST00000483030 ADAM33Q9BZ11 813 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 ST6GALNAC4Q9H4F1 302 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 ARHGAP26Q9UNA1 814 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 SNX9Q9Y5X1 595 aa7.92□□□□□ -1.14
CSDE1-206ENST00000483030 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 GOLGA8IPA6NC78 632 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 MYMKA6NI61 221 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 GOLGA8JA6NMD2 632 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 LEFTY2O00292 366 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 GABRDO14764 452 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 MAP3K13O43283 966 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 ATP2C2O75185 946 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 ALDH1A2O94788 518 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 NFATC1O95644 943 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 KRT19P08727 400 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 HNRNPLP14866 589 aaKnown RBP eCLIP7.91□□□□□ -1.14
CSDE1-206ENST00000483030 PCSK1P29120 753 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 LONP1P36776 959 aaKnown RBP7.91□□□□□ -1.14
CSDE1-206ENST00000483030 SLC6A11P48066 632 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 LHX1P48742 406 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 RBP5P82980 135 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 ZXDBP98169 803 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 SOWAHAQ2M3V2 549 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 GAB4Q2WGN9 574 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 CFAP221Q4G0U5 840 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 TRIM61Q5EBN2 209 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 EMC10Q5UCC4 262 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 KIAA1211LQ6NV74 962 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 FAM171BQ6P995 826 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 TMEM92Q6UXU6 159 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 LPCAT2Q7L5N7 544 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 SFTPA1Q8IWL2 248 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 TMEFF1Q8IYR6 380 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms