RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 FNIP2Q9P278 1114 aa4.6□□□□□ -1.67
CBX3-207ENST00000481300 TESQ9UGI8 421 aaKnown RBP4.6□□□□□ -1.67
CBX3-207ENST00000481300 MID2Q9UJV3 735 aa4.6□□□□□ -1.67
CBX3-207ENST00000481300 SPATA31A3Q5VYP0 1347 aa4.6□□□□□ -1.67
CBX3-207ENST00000481300 RB1CC1Q8TDY2 1594 aa4.6□□□□□ -1.67
CBX3-207ENST00000481300 GRID2IPA4D2P6 1211 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 TMEM200CA6NKL6 621 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 RAB27BO00194 218 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 CCP110O43303 1012 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 FGF18O76093 207 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 SPDEFO95238 335 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 GCP02774 474 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 FGFR2P21802 821 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 BMP5P22003 454 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 ACVR2AP27037 513 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 IL1R2P27930 398 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 SERPINB3P29508 390 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 MAPK10P53779 464 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 PRKAG1P54619 331 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 HTRA4P83105 476 aaPredicted RBP4.59□□□□□ -1.67
CBX3-207ENST00000481300 PMS2P11Q13670 270 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 E2F2Q14209 437 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 ARID4BQ4LE39 1312 aaPredicted RBP4.59□□□□□ -1.67
CBX3-207ENST00000481300 LY6G5CQ5SRR4 150 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 RBM20Q5T481 1227 aaKnown RBP4.59□□□□□ -1.67
CBX3-207ENST00000481300 HIBCHQ6NVY1 386 aaPredicted RBP4.59□□□□□ -1.67
CBX3-207ENST00000481300 ZDHHC24Q6UX98 284 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 TMPRSS9Q7Z410 1059 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 SPICE1Q8N0Z3 855 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 TXLNBQ8N3L3 684 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 BRI3BPQ8WY22 251 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 PTCD3Q96EY7 689 aaKnown RBP4.59□□□□□ -1.67
CBX3-207ENST00000481300 NELL2Q99435 816 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 ADAM2Q99965 735 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 PTDSS2Q9BVG9 487 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 SELENOOQ9BVL4 669 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 TAGLN3Q9UI15 199 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 LRCH1Q9Y2L9 728 aa4.59□□□□□ -1.67
CBX3-207ENST00000481300 CENPVL1A0A0U1RR11 272 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 A0A1W2PPC4 97 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 LPXNO60711 386 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 RASAL1O95294 804 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 ITGAMP11215 1152 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 HARSP12081 509 aaKnown RBP4.58□□□□□ -1.68
CBX3-207ENST00000481300 IL1R1P14778 569 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 TPH1P17752 444 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 GATA3P23771 443 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 PPIFP30405 207 aaKnown RBP4.58□□□□□ -1.68
CBX3-207ENST00000481300 ADRA1BP35368 520 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 CPT1AP50416 773 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 GRM1Q13255 1194 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 TP53BP2Q13625 1128 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 ARHGEF7Q14155 803 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 ARHGAP40Q5TG30 622 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 CACHD1Q5VU97 1274 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 RRAGBQ5VZM2 374 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 ICE2Q659A1 982 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 SKAP1Q86WV1 359 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 ZNF280BQ86YH2 543 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 MYLK4Q86YV6 388 aaPredicted RBP4.58□□□□□ -1.68
CBX3-207ENST00000481300 ARHGEF19Q8IW93 802 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 SPARTQ8N0X7 666 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 RNF152Q8N8N0 203 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 FANCBQ8NB91 859 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 B3GALNT2Q8NCR0 500 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 CCDC150Q8NCX0 1101 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 VPS37AQ8NEZ2 397 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 BPIFB1Q8TDL5 484 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 KIAA1191Q96A73 305 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 LRRC46Q96FV0 321 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 OSBPL9Q96SU4 736 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 EIF2AQ9BY44 585 aaKnown RBP4.58□□□□□ -1.68
CBX3-207ENST00000481300 TPSD1Q9BZJ3 242 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 CASS4Q9NQ75 786 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 XPNPEP3Q9NQH7 507 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 ANKFY1Q9P2R3 1169 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 MYO1AQ9UBC5 1043 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 TBC1D30Q9Y2I9 924 aa4.58□□□□□ -1.68
CBX3-207ENST00000481300 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.58□□□□□ -1.68
CBX3-207ENST00000481300 H7C4K7 107 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 hCG_1984214I3L0E3 225 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 RGS10O43665 173 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 PPFIA2O75334 1257 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 IDEP14735 1019 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 ABCB4P21439 1286 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 PTDSS1P48651 473 aaKnown RBP4.57□□□□□ -1.68
CBX3-207ENST00000481300 DGKEP52429 567 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 ITGA8P53708 1063 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 MYO1EQ12965 1108 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 STK3Q13188 491 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 PTPAQ15257 358 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 DGKKQ5KSL6 1271 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 C10orf62Q5T681 223 aaPredicted RBP4.57□□□□□ -1.68
CBX3-207ENST00000481300 RGS7BPQ6MZT1 257 aaPredicted RBP4.57□□□□□ -1.68
CBX3-207ENST00000481300 CATSPERGQ6ZRH7 1159 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 SLC15A3Q8IY34 581 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.57□□□□□ -1.68
CBX3-207ENST00000481300 ENAHQ8N8S7 591 aaPredicted RBP4.57□□□□□ -1.68
CBX3-207ENST00000481300 SLC30A5Q8TAD4 765 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 SSH3Q8TE77 659 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms