RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 FHOD1Q9Y613 1164 aa12.08□□□□□ -0.48
SRRT-211ENST00000478693 CHD7Q9P2D1 2997 aa12.08□□□□□ -0.48
SRRT-211ENST00000478693 F8VP50 259 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 TPM3P06753 285 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 PAEPP09466 180 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 VDRP11473 427 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 UBASH3AP57075 661 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 MAP3K7CLP57077 242 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 KCNMA1Q12791 1236 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 GOLGA7BQ2TAP0 167 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 PPP1R26Q5T8A7 1209 aaPredicted RBP12.07□□□□□ -0.48
SRRT-211ENST00000478693 KLHDC7AQ5VTJ3 777 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 UBR7Q8N806 425 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 TDRD5Q8NAT2 981 aaKnown RBP12.07□□□□□ -0.48
SRRT-211ENST00000478693 LEMD2Q8NC56 503 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 PSMG2Q969U7 264 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 ACSF2Q96CM8 615 aaPredicted RBP12.07□□□□□ -0.48
SRRT-211ENST00000478693 RPGRIP1Q96KN7 1286 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 SPAG5Q96R06 1193 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 PHF7Q9BWX1 381 aaPredicted RBP12.07□□□□□ -0.48
SRRT-211ENST00000478693 WDR6Q9NNW5 1121 aaKnown RBP12.07□□□□□ -0.48
SRRT-211ENST00000478693 DNMT3BQ9UBC3 853 aaKnown RBP12.07□□□□□ -0.48
SRRT-211ENST00000478693 MRPS23Q9Y3D9 190 aaKnown RBP12.07□□□□□ -0.48
SRRT-211ENST00000478693 NR2E1Q9Y466 385 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 SZT2Q5T011 3432 aa12.07□□□□□ -0.48
SRRT-211ENST00000478693 SLC38A8A6NNN8 435 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 M0QYV0 167 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 ZNF197O14709 1029 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 THAP12O43422 761 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 MED7O43513 233 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 UCHL3P15374 230 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 ACO1P21399 889 aaKnown RBP12.06□□□□□ -0.48
SRRT-211ENST00000478693 BRD2P25440 801 aaKnown RBP12.06□□□□□ -0.48
SRRT-211ENST00000478693 POLR2FP61218 127 aaKnown RBP12.06□□□□□ -0.48
SRRT-211ENST00000478693 MTMR3Q13615 1198 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 DRAP1Q14919 205 aaPredicted RBP12.06□□□□□ -0.48
SRRT-211ENST00000478693 ARHGAP15Q53QZ3 475 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 DENND5BQ6ZUT9 1274 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 APTXQ7Z2E3 356 aaKnown RBP12.06□□□□□ -0.48
SRRT-211ENST00000478693 CACNA2D4Q7Z3S7 1137 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 DNAJB7Q7Z6W7 309 aaPredicted RBP12.06□□□□□ -0.48
SRRT-211ENST00000478693 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 FUKQ8N0W3 1084 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 ING5Q8WYH8 240 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 C8orf48Q96LL4 319 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 ERGIC2Q96RQ1 377 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 HNRNPABQ99729 332 aaKnown RBP12.06□□□□□ -0.48
SRRT-211ENST00000478693 SLITRK6Q9H5Y7 841 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 NLRC4Q9NPP4 1024 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 PLCB1Q9NQ66 1216 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
SRRT-211ENST00000478693 EHD2Q9NZN4 543 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 UXTQ9UBK9 157 aaPredicted RBP12.06□□□□□ -0.48
SRRT-211ENST00000478693 AJAP1Q9UKB5 411 aaPredicted RBP12.06□□□□□ -0.48
SRRT-211ENST00000478693 TSPAN16Q9UKR8 245 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 KIAA1257Q9ULG3 409 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 DAAM1Q9Y4D1 1078 aa12.06□□□□□ -0.48
SRRT-211ENST00000478693 A0A1B0GTH6 734 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 A0A1W2PRU2 124 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 LRRC10BA6NIK2 292 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 TEX33O43247 280 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 CBFA2T2O43439 604 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 FGF19O95750 216 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 PNMA6AP0CW24 399 aaPredicted RBP12.05□□□□□ -0.48
SRRT-211ENST00000478693 NPR3P17342 541 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 GABRR2P28476 465 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 CDC25CP30307 473 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 GNA15P30679 374 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 SSTR3P32745 418 aaPredicted RBP12.05□□□□□ -0.48
SRRT-211ENST00000478693 SLC5A3P53794 718 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 CACNA2D1P54289 1103 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 BCAT1P54687 386 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 STILQ15468 1287 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 PTPN21Q16825 1174 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 ARHGAP17Q68EM7 881 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 PAQR9Q6ZVX9 377 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 OTOP3Q7RTS5 596 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 ADHFE1Q8IWW8 467 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 ADAMTS19Q8TE59 1207 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 SHC3Q92529 594 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 SPATA17Q96L03 361 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 GANQ9H2C0 597 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 ATXN3LQ9H3M9 355 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 ZNF334Q9HCZ1 680 aaPredicted RBP12.05□□□□□ -0.48
SRRT-211ENST00000478693 IFNKQ9P0W0 207 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 SIK3Q9Y2K2 1263 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 MYO9BQ13459 2157 aa12.05□□□□□ -0.48
SRRT-211ENST00000478693 RNF225M0QZC1 329 aaPredicted RBP12.04□□□□□ -0.48
SRRT-211ENST00000478693 NOL4O94818 638 aa12.04□□□□□ -0.48
SRRT-211ENST00000478693 RTN3O95197 1032 aaPredicted RBP12.04□□□□□ -0.48
SRRT-211ENST00000478693 PAPLNO95428 1278 aa12.04□□□□□ -0.48
SRRT-211ENST00000478693 CALCAP01258 141 aa12.04□□□□□ -0.48
SRRT-211ENST00000478693 GJA1P17302 382 aa12.04□□□□□ -0.48
SRRT-211ENST00000478693 CEBPBP17676 345 aa12.04□□□□□ -0.48
SRRT-211ENST00000478693 PDE6CP51160 858 aa12.04□□□□□ -0.48
SRRT-211ENST00000478693 ZNF132P52740 706 aa12.04□□□□□ -0.48
SRRT-211ENST00000478693 PTK2Q05397 1052 aa12.04□□□□□ -0.48
SRRT-211ENST00000478693 BST2Q10589 180 aaKnown RBP12.04□□□□□ -0.48
SRRT-211ENST00000478693 SLC5A9Q2M3M2 681 aa12.04□□□□□ -0.48
SRRT-211ENST00000478693 CLEC20AQ6ZU45 233 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms