RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ZXDBP98169 803 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 LMNB2Q03252 620 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 GRSF1Q12849 480 aaKnown RBP eCLIP12.48□□□□□ -0.41
VARS2-208ENST00000477052 MYO1EQ12965 1108 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 MTF1Q14872 753 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 ZNF77Q15935 545 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 MDH1BQ5I0G3 518 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 FAM26FQ5R3K3 315 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 FAM171BQ6P995 826 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 C1orf228Q6PIY5 440 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 EPM2AIP1Q7L775 607 aaPredicted RBP12.48□□□□□ -0.41
VARS2-208ENST00000477052 TRAPPC11Q7Z392 1133 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 LIMS2Q7Z4I7 341 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 SH3RF2Q8TEC5 729 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 ZNF516Q92618 1163 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 HHIPQ96QV1 700 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 GZF1Q9H116 711 aaPredicted RBP12.48□□□□□ -0.41
VARS2-208ENST00000477052 DPEP3Q9H4B8 488 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 SMOC1Q9H4F8 434 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 ECT2Q9H8V3 914 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 ABCB6Q9NP58 842 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 SEMA4GQ9NTN9 838 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 TMEM30AQ9NV96 361 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 DUS2Q9NX74 493 aaKnown RBP12.48□□□□□ -0.41
VARS2-208ENST00000477052 GCNT4Q9P109 453 aa12.48□□□□□ -0.41
VARS2-208ENST00000477052 MAGEC2Q9UBF1 373 aaPredicted RBP12.48□□□□□ -0.41
VARS2-208ENST00000477052 R3HCC1Q9Y3T6 440 aaKnown RBP12.48□□□□□ -0.41
VARS2-208ENST00000477052 MORC2Q9Y6X9 1032 aaPredicted RBP12.48□□□□□ -0.41
VARS2-208ENST00000477052 ANAPC1Q9H1A4 1944 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 TRAV19A0A0A6YYK7 116 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 CLDN5O00501 218 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 TRDMT1O14717 391 aaKnown RBP12.47□□□□□ -0.41
VARS2-208ENST00000477052 POLR2DO15514 142 aaKnown RBP12.47□□□□□ -0.41
VARS2-208ENST00000477052 CUTAO60888 179 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 PAPSS2O95340 614 aaPredicted RBP12.47□□□□□ -0.41
VARS2-208ENST00000477052 USP17L7P0C7H9 530 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 TNNI1P19237 187 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 KCNA4P22459 653 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 DDX6P26196 483 aaKnown RBP eCLIP12.47□□□□□ -0.41
VARS2-208ENST00000477052 IFRD2Q12894 506 aaPredicted RBP12.47□□□□□ -0.41
VARS2-208ENST00000477052 PSMD2Q13200 908 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 PKP1Q13835 747 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 SF3A2Q15428 464 aaKnown RBP12.47□□□□□ -0.41
VARS2-208ENST00000477052 SNRNP35Q16560 246 aaKnown RBP12.47□□□□□ -0.41
VARS2-208ENST00000477052 CFAP221Q4G0U5 840 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 STXBP4Q6ZWJ1 553 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 HS2ST1Q7LGA3 356 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 KBTBD6Q86V97 674 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 WDR5BQ86VZ2 330 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 WDR49Q8IV35 697 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 GPR161Q8N6U8 529 aaKnown RBP12.47□□□□□ -0.41
VARS2-208ENST00000477052 OR6B3Q8NGW1 331 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 ZNF507Q8TCN5 953 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 PLEKHO2Q8TD55 490 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 SCFD1Q8WVM8 642 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 TRMT2BQ96GJ1 504 aaKnown RBP12.47□□□□□ -0.41
VARS2-208ENST00000477052 PCED1BQ96HM7 432 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 CHAMP1Q96JM3 812 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 MYRFLQ96LU7 910 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 ZNF396Q96N95 335 aaPredicted RBP12.47□□□□□ -0.41
VARS2-208ENST00000477052 P2RY13Q9BPV8 354 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 ARRDC1-AS1Q9H2J1 176 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 SLC39A2Q9NP94 309 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 UXTQ9UBK9 157 aaPredicted RBP12.47□□□□□ -0.41
VARS2-208ENST00000477052 CDH9Q9ULB4 789 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 SLC8A2Q9UPR5 921 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 INVSQ9Y283 1065 aa12.47□□□□□ -0.41
VARS2-208ENST00000477052 RALGAPA1Q6GYQ0 2036 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 PRR5-ARHGAP8B1AHC4 643 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 F8VP50 259 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 DCLK1O15075 740 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 PPP6R2O75170 966 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 ABL1P00519 1130 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 HDCP19113 662 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 WARSP23381 471 aaKnown RBP12.46□□□□□ -0.41
VARS2-208ENST00000477052 GNL1P36915 607 aaPredicted RBP12.46□□□□□ -0.41
VARS2-208ENST00000477052 RAP1GAPP47736 663 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 IFNAR2P48551 515 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 SEC13P55735 322 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 MYL6P60660 151 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 ARHGAP8P85298 464 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 FAM160A1Q05DH4 1040 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 CYP24A1Q07973 514 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 USP4Q13107 963 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 CUL4BQ13620 913 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 KCNB1Q14721 858 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 PDGFRLQ15198 375 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 EML3Q32P44 896 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 C4orf50Q6ZRC1 276 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 PRR23CQ6ZRP0 262 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 SFTPA1Q8IWL2 248 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 SYNPOQ8N3V7 929 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 IQUBQ8NA54 791 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 RPLP0P6Q8NHW5 317 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 OSCP1Q8WVF1 389 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 CGRRF1Q99675 332 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 C7orf25Q9BPX7 421 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 ZNF518BQ9C0D4 1074 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 RNF38Q9H0F5 515 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 SNX25Q9H3E2 840 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms