RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TINF2Q9BSI4 451 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 EIF2AQ9BY44 585 aaKnown RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 VRTNQ9H8Y1 702 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 KCNK9Q9NPC2 374 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 SNTG2Q9NY99 539 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 HGSO14964 777 aaPredicted RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 MIPP30301 263 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 VCPP55072 806 aaKnown RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 CNGA2Q16280 664 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 GLRA4Q5JXX5 417 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 FAM102AQ5T9C2 384 aaPredicted RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 TRNP1Q6NT89 227 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 DRICH1Q6PGQ1 229 aaPredicted RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 ACTL9Q8TC94 416 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 HSPH1Q92598 858 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 HAUS2Q9NVX0 235 aa17.49■□□□□ 0.39
TVP23B-202ENST00000476139 BARX2Q9UMQ3 279 aaPredicted RBP17.49■□□□□ 0.39
TVP23B-202ENST00000476139 SRRM3A6NNA2 597 aaPredicted RBP17.48■□□□□ 0.39
TVP23B-202ENST00000476139 DYNC1LI2O43237 492 aaPredicted RBP17.48■□□□□ 0.39
TVP23B-202ENST00000476139 NPTXRO95502 500 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 PECAM1P16284 738 aaPredicted RBP17.48■□□□□ 0.39
TVP23B-202ENST00000476139 KDELR1P24390 212 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 GTF2A1P52655 376 aaPredicted RBP17.48■□□□□ 0.39
TVP23B-202ENST00000476139 NRLP54845 237 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 RBP5P82980 135 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 OTUD4Q01804 1114 aaKnown RBP17.48■□□□□ 0.39
TVP23B-202ENST00000476139 LMNB2Q03252 620 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 GRB14Q14449 540 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 ZNF268Q14587 947 aaPredicted RBP17.48■□□□□ 0.39
TVP23B-202ENST00000476139 DGKDQ16760 1214 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 POLNQ7Z5Q5 900 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 GTF3C2Q8WUA4 911 aaPredicted RBP17.48■□□□□ 0.39
TVP23B-202ENST00000476139 LPIN3Q9BQK8 851 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 ADPGKQ9BRR6 497 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 MORF4L1Q9UBU8 362 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 TSPAN16Q9UKR8 245 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 GOLGA8MH3BSY2 632 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 MAGEA4P43358 317 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 MTM1Q13496 603 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 ANKRD20A8PQ5CZ79 823 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 CAPN12Q6ZSI9 719 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 KCTD6Q8NC69 237 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 DYDC1Q8WWB3 177 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 SERPINB12Q96P63 405 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 CYP3A43Q9HB55 503 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.48■□□□□ 0.39
TVP23B-202ENST00000476139 PLXNA1Q9UIW2 1896 aa17.48■□□□□ 0.39
TVP23B-202ENST00000476139 C5orf60A6NFR6 353 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 E5RJQ4 531 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 DNALI1O14645 258 aaPredicted RBP17.47■□□□□ 0.39
TVP23B-202ENST00000476139 VDRP11473 427 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 P4HA1P13674 534 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 RGS7P49802 495 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 GAD2Q05329 585 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 MYO1EQ12965 1108 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 C15orf59Q2T9L4 293 aaPredicted RBP17.47■□□□□ 0.39
TVP23B-202ENST00000476139 ZNF467Q7Z7K2 595 aaPredicted RBP17.47■□□□□ 0.39
TVP23B-202ENST00000476139 ZCCHC9Q8N567 271 aaKnown RBP17.47■□□□□ 0.39
TVP23B-202ENST00000476139 BBOF1Q8ND07 529 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 GDAP1Q8TB36 358 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 FNIP1Q8TF40 1166 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 CENPTQ96BT3 561 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 MCRS1Q96EZ8 462 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 OSMRQ99650 979 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 MRPL45Q9BRJ2 306 aaKnown RBP17.47■□□□□ 0.39
TVP23B-202ENST00000476139 ADAM33Q9BZ11 813 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 CD248Q9HCU0 757 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 SAYSD1Q9NPB0 183 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 ITGA11Q9UKX5 1188 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 DRG1Q9Y295 367 aaKnown RBP17.47■□□□□ 0.39
TVP23B-202ENST00000476139 C2CD2Q9Y426 696 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 NME7Q9Y5B8 376 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 SNX9Q9Y5X1 595 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 COL1A2P08123 1366 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 BANF1O75531 89 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 HMGCRP04035 888 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 PFKMP08237 780 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 GABRB2P47870 512 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 GCLCP48506 637 aaPredicted RBP17.47■□□□□ 0.39
TVP23B-202ENST00000476139 HADHQ16836 314 aaKnown RBP17.47■□□□□ 0.39
TVP23B-202ENST00000476139 CROCCP2Q86T23 111 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 PNMA8AQ86V59 439 aaPredicted RBP17.47■□□□□ 0.39
TVP23B-202ENST00000476139 SLC35B2Q8TB61 432 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 C18orf25Q96B23 403 aaPredicted RBP17.47■□□□□ 0.39
TVP23B-202ENST00000476139 PEBP4Q96S96 227 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 ADAMTS10Q9H324 1103 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 ABHD16BQ9H3Z7 469 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 SLC40A1Q9NP59 571 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 TPX2Q9ULW0 747 aaKnown RBP17.47■□□□□ 0.39
TVP23B-202ENST00000476139 USP18Q9UMW8 372 aa17.47■□□□□ 0.39
TVP23B-202ENST00000476139 IQCA1LA6NCM1 817 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 HCRTO43612 131 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 KRT7P08729 469 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 PTPN7P35236 360 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 MMRN1Q13201 1228 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 HIC1Q14526 733 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 CDO1Q16878 200 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 PPP1R26Q5T8A7 1209 aaPredicted RBP17.46■□□□□ 0.39
TVP23B-202ENST00000476139 ACOT1Q86TX2 421 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 NKD2Q969F2 451 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms