RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 CBWD1Q9BRT8 395 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 PCIF1Q9H4Z3 704 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 PDE11AQ9HCR9 933 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 VPS45Q9NRW7 570 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 PANK4Q9NVE7 773 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 WNT6Q9Y6F9 365 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 FRMD3A2A2Y4 597 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 TM4SF5O14894 197 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 RHOBTB1O94844 696 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 NFATC1O95644 943 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 TNNC2P02585 160 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 TCF3P15923 654 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 PFKLP17858 780 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 PSMD2Q13200 908 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 DMC1Q14565 340 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 SURF1Q15526 300 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 EML3Q32P44 896 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 STPG1Q5TH74 334 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 NAIF1Q69YI7 327 aaPredicted RBP11.6□□□□□ -0.55
CDRT1-205ENST00000475944 FAM171BQ6P995 826 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 VSTM1Q6UX27 236 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 CCDC65Q8IXS2 484 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 ARL14EPQ8N8R7 260 aaPredicted RBP11.6□□□□□ -0.55
CDRT1-205ENST00000475944 SH3RF2Q8TEC5 729 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 SPATA17Q96L03 361 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 CLIC6Q96NY7 704 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 SLC22A12Q96S37 553 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 SYT15Q9BQS2 421 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 RXFP3Q9NSD7 469 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 INTS13Q9NVM9 706 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 EHD2Q9NZN4 543 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 GCNT4Q9P109 453 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 MAGEC2Q9UBF1 373 aaPredicted RBP11.6□□□□□ -0.55
CDRT1-205ENST00000475944 EBF1Q9UH73 591 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 SIX4Q9UIU6 781 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 ANGPTL2Q9UKU9 493 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 CDH9Q9ULB4 789 aa11.6□□□□□ -0.55
CDRT1-205ENST00000475944 C2orf78A6NCI8 922 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 ZNF233A6NK53 670 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 HCRTO43612 131 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 HDCP19113 662 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 ANXA13P27216 316 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 DGKEP52429 567 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 CEBPZQ03701 1054 aaKnown RBP11.59□□□□□ -0.55
CDRT1-205ENST00000475944 CUL4AQ13619 759 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 CCDC142Q17RM4 750 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 DUOXA2Q1HG44 320 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 LMBRD2Q68DH5 695 aaPredicted RBP11.59□□□□□ -0.55
CDRT1-205ENST00000475944 C11orf74Q86VG3 221 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 EZH1Q92800 747 aaPredicted RBP11.59□□□□□ -0.55
CDRT1-205ENST00000475944 HPDLQ96IR7 371 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 DUSP15Q9H1R2 295 aaPredicted RBP11.59□□□□□ -0.55
CDRT1-205ENST00000475944 POLR3BQ9NW08 1133 aaPredicted RBP11.59□□□□□ -0.55
CDRT1-205ENST00000475944 ARHGAP26Q9UNA1 814 aa11.59□□□□□ -0.55
CDRT1-205ENST00000475944 MORC2Q9Y6X9 1032 aaPredicted RBP11.59□□□□□ -0.55
CDRT1-205ENST00000475944 EML5Q05BV3 1969 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 TRIM66O15016 1216 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 ATP2C2O75185 946 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 PRPF6O94906 941 aaKnown RBP11.58□□□□□ -0.56
CDRT1-205ENST00000475944 CAVIN2O95810 425 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 BDNFP23560 247 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 PMLP29590 882 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 GBP1P32455 592 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 GRIK1P39086 918 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 PPP3CCP48454 512 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 PSMC1P62191 440 aaKnown RBP11.58□□□□□ -0.56
CDRT1-205ENST00000475944 CREB5Q02930 508 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 RESTQ13127 1097 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 N4BP2L1Q5TBK1 243 aaPredicted RBP11.58□□□□□ -0.56
CDRT1-205ENST00000475944 RNF43Q68DV7 783 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 SCARA3Q6AZY7 606 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 DENND5BQ6ZUT9 1274 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 LIMS2Q7Z4I7 341 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 WDR49Q8IV35 697 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 TSTD1Q8NFU3 115 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 KBTBD7Q8WVZ9 684 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 MYLPFQ96A32 169 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 FAM84AQ96KN4 292 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 MMS19Q96T76 1030 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 EDEM2Q9BV94 578 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 LSM14BQ9BX40 385 aaKnown RBP11.58□□□□□ -0.56
CDRT1-205ENST00000475944 FGFBP2Q9BYJ0 223 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 LRRC27Q9C0I9 530 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 SMOC1Q9H4F8 434 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 KIAA1586Q9HCI6 787 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 TRPM5Q9NZQ8 1165 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 SPTBN2O15020 2390 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 SPAG17Q6Q759 2223 aa11.58□□□□□ -0.56
CDRT1-205ENST00000475944 HELZP42694 1942 aaKnown RBP11.57□□□□□ -0.56
CDRT1-205ENST00000475944 ANAPC1Q9H1A4 1944 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 CACNA1BQ00975 2339 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 BCLAF3A2AJT9 711 aaKnown RBP11.57□□□□□ -0.56
CDRT1-205ENST00000475944 DCLK1O15075 740 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 PDGFRBP09619 1106 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 WARSP23381 471 aaKnown RBP11.57□□□□□ -0.56
CDRT1-205ENST00000475944 LMO2P25791 158 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 SHC2P98077 582 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 CYP27A1Q02318 531 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 SLC39A14Q15043 492 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 USP39Q53GS9 565 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms