RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 USP33Q8TEY7 942 aa12.36□□□□□ -0.43
EXOSC1-207ENST00000474309 TMX3Q96JJ7 454 aa12.36□□□□□ -0.43
EXOSC1-207ENST00000474309 SPATA17Q96L03 361 aa12.36□□□□□ -0.43
EXOSC1-207ENST00000474309 SLC22A12Q96S37 553 aa12.36□□□□□ -0.43
EXOSC1-207ENST00000474309 FAM213AQ9BRX8 229 aa12.36□□□□□ -0.43
EXOSC1-207ENST00000474309 EDEM2Q9BV94 578 aa12.36□□□□□ -0.43
EXOSC1-207ENST00000474309 LINC00597Q9H2U6 94 aa12.36□□□□□ -0.43
EXOSC1-207ENST00000474309 STK17AQ9UEE5 414 aa12.36□□□□□ -0.43
EXOSC1-207ENST00000474309 ARHGAP26Q9UNA1 814 aa12.36□□□□□ -0.43
EXOSC1-207ENST00000474309 PCDHB13Q9Y5F0 798 aa12.36□□□□□ -0.43
EXOSC1-207ENST00000474309 K7EQS6 105 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 KHNYNO15037 678 aaKnown RBP12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 DCLK1O15075 740 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 NFATC1O95644 943 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 CKMP06732 381 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 CEACAM1P13688 526 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 CSRP1P21291 193 aaKnown RBP12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 GBP1P32455 592 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 PPP3CCP48454 512 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 MRPS21P82921 87 aaKnown RBP12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 GRIN1Q05586 938 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 PSMD2Q13200 908 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 MAPRE1Q15691 268 aaKnown RBP12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 LARP1BQ659C4 914 aaKnown RBP12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 NAIF1Q69YI7 327 aaPredicted RBP12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 TCEAL6Q6IPX3 200 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 C4orf50Q6ZRC1 276 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 DYMQ7RTS9 669 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 LIMS2Q7Z4I7 341 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 ADGRG2Q8IZP9 1017 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 TSTD1Q8NFU3 115 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 SH3RF2Q8TEC5 729 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 TCEAL3Q969E4 200 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 DNAJC19Q96DA6 116 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 MRPL44Q9H9J2 332 aaKnown RBP12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 TRPC7Q9HCX4 862 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 MAGEC2Q9UBF1 373 aaPredicted RBP12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 CCDC39Q9UFE4 941 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 SNX9Q9Y5X1 595 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 WNT6Q9Y6F9 365 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 CEP295Q9C0D2 2601 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 PTPRDP23468 1912 aa12.35□□□□□ -0.43
EXOSC1-207ENST00000474309 A0A0A0MRY4 1105 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 CDX4O14627 284 aaPredicted RBP12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 KIAA0391O15091 583 aaKnown RBP12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 FAM163BP0C2L3 166 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 ACAT1P24752 427 aaKnown RBP12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 OPRD1P41143 372 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 NOVA1P51513 510 aaKnown RBP12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 WNT7BP56706 349 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 KCNA1Q09470 495 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 ALCAMQ13740 583 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 KCNB1Q14721 858 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 CRY1Q16526 586 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 SOWAHAQ2M3V2 549 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 HSF5Q4G112 596 aaPredicted RBP12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 SV2BQ7L1I2 683 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 OSTM1Q86WC4 334 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 SCN4BQ8IWT1 228 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 ADGRF2Q8IZF7 708 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 KDF1Q8NAX2 398 aaPredicted RBP12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 STKLD1Q8NE28 680 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 OLIG1Q8TAK6 271 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 CNOT6LQ96LI5 555 aaKnown RBP12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 IKZF4Q9H2S9 585 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 TMEM9BQ9NQ34 198 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 OLFML3Q9NRN5 406 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 RBAKQ9NYW8 714 aaPredicted RBP12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 EHD2Q9NZN4 543 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 TRPM5Q9NZQ8 1165 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 EVLQ9UI08 416 aaPredicted RBP12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 CDH9Q9ULB4 789 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 MMP17Q9ULZ9 603 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 WASF3Q9UPY6 502 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 CACNA1EQ15878 2313 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 KIAA1549LQ6ZVL6 1849 aa12.34□□□□□ -0.43
EXOSC1-207ENST00000474309 LNP1A1A4G5 178 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 C2orf78A6NCI8 922 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 MYMKA6NI61 221 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 SLC9A3R1O14745 358 aaPredicted RBP12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 EIF2DP41214 584 aaKnown RBP12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 SLC7A9P82251 487 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 MYO1EQ12965 1108 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 SURF1Q15526 300 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 SPDYCQ5MJ68 293 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 SH3PXD2AQ5TCZ1 1133 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 ZSWIM2Q8NEG5 633 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 SAAL1Q96ER3 474 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 ANKRD36BP1Q96IX9 119 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 EPSTI1Q96J88 318 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 TTLL2Q9BWV7 592 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 PDE11AQ9HCR9 933 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 SIX4Q9UIU6 781 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 SMC3Q9UQE7 1217 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 R3HCC1Q9Y3T6 440 aaKnown RBP12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 LAMA1P25391 3075 aa12.33□□□□□ -0.44
EXOSC1-207ENST00000474309 TMEM8BA6NDV4 472 aa12.32□□□□□ -0.44
EXOSC1-207ENST00000474309 LEFTY2O00292 366 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms