RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 LINC00301Q8NCQ3 95 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 C2orf15Q8WU43 125 aaKnown RBP10.15□□□□□ -0.78
BRD3-205ENST00000473349 CACTINQ8WUQ7 758 aaKnown RBP10.15□□□□□ -0.78
BRD3-205ENST00000473349 MRPS31Q92665 395 aaKnown RBP10.15□□□□□ -0.78
BRD3-205ENST00000473349 MYLPFQ96A32 169 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 HPDLQ96IR7 371 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 HHIPQ96QV1 700 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 ACBD6Q9BR61 282 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 MRPL45Q9BRJ2 306 aaKnown RBP10.15□□□□□ -0.78
BRD3-205ENST00000473349 BLZF1Q9H2G9 400 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 RXFP3Q9NSD7 469 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 SEMA4GQ9NTN9 838 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 TMEM30AQ9NV96 361 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 THG1LQ9NWX6 298 aaKnown RBP10.15□□□□□ -0.78
BRD3-205ENST00000473349 GDAP2Q9NXN4 497 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 HSPBP1Q9NZL4 362 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 ITGA11Q9UKX5 1188 aa10.15□□□□□ -0.78
BRD3-205ENST00000473349 CDV3Q9UKY7 258 aaKnown RBP10.15□□□□□ -0.78
BRD3-205ENST00000473349 DENND4CQ5VZ89 1909 aa10.15□□□□□ -0.79
BRD3-205ENST00000473349 LAMA1P25391 3075 aa10.15□□□□□ -0.79
BRD3-205ENST00000473349 EPG5Q9HCE0 2579 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 PRR5-ARHGAP8B1AHC4 643 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 AXIN1O15169 862 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 TGFB1I1O43294 461 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 RNF40O75150 1001 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 CST3P01034 146 aaPredicted RBP10.14□□□□□ -0.79
BRD3-205ENST00000473349 RETP07949 1114 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 CSH1P0DML2 217 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 CSH2P0DML3 217 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 DLATP10515 647 aaKnown RBP10.14□□□□□ -0.79
BRD3-205ENST00000473349 BDNFP23560 247 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 CNR2P34972 360 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 GJA4P35212 333 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 NASPP49321 788 aaPredicted RBP10.14□□□□□ -0.79
BRD3-205ENST00000473349 CYP2J2P51589 502 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 CACNA2D1P54289 1103 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 ASIC1P78348 528 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 ARHGAP8P85298 464 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 PLCB2Q00722 1185 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 MYL7Q01449 175 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 LMNB2Q03252 620 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 DSG2Q14126 1118 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 MTF1Q14872 753 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 SF3A2Q15428 464 aaKnown RBP10.14□□□□□ -0.79
BRD3-205ENST00000473349 NFE2Q16621 373 aaPredicted RBP10.14□□□□□ -0.79
BRD3-205ENST00000473349 TMEM196Q5HYL7 178 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 KBTBD6Q86V97 674 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 SPATA2LQ8IUW3 424 aaPredicted RBP10.14□□□□□ -0.79
BRD3-205ENST00000473349 SFTPA1Q8IWL2 248 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 CCDC65Q8IXS2 484 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 GRAMD1CQ8IYS0 662 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 SYNPOQ8N3V7 929 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 LRRC52Q8N7C0 313 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 LEO1Q8WVC0 666 aaPredicted RBP10.14□□□□□ -0.79
BRD3-205ENST00000473349 CCDC127Q96BQ5 260 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 CHAMP1Q96JM3 812 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 CNTNAP3BQ96NU0 1288 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 SYT15Q9BQS2 421 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 CNTNAP3Q9BZ76 1288 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 TRIM9Q9C026 710 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 GZF1Q9H116 711 aaPredicted RBP10.14□□□□□ -0.79
BRD3-205ENST00000473349 LINC00597Q9H2U6 94 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 DPEP3Q9H4B8 488 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 KBTBD4Q9NVX7 518 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 INVSQ9Y283 1065 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 CHD8Q9HCK8 2581 aa10.14□□□□□ -0.79
BRD3-205ENST00000473349 ZNF233A6NK53 670 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 CLDN5O00501 218 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 TRDMT1O14717 391 aaKnown RBP10.13□□□□□ -0.79
BRD3-205ENST00000473349 DCLK1O15075 740 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 SPTLC2O15270 562 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 PAPSS2O95340 614 aaPredicted RBP10.13□□□□□ -0.79
BRD3-205ENST00000473349 LDHAP00338 332 aaKnown RBP10.13□□□□□ -0.79
BRD3-205ENST00000473349 CKMP06732 381 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 CASP4P49662 377 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 RPL10AP62906 217 aaKnown RBP10.13□□□□□ -0.79
BRD3-205ENST00000473349 AMPD2Q01433 879 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 CYP27A1Q02318 531 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 MESP2Q0VG99 397 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 GRSF1Q12849 480 aaKnown RBP eCLIP10.13□□□□□ -0.79
BRD3-205ENST00000473349 PKP1Q13835 747 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 ZNF77Q15935 545 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 MDH1BQ5I0G3 518 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 CC2D1AQ6P1N0 951 aaPredicted RBP10.13□□□□□ -0.79
BRD3-205ENST00000473349 FAM171BQ6P995 826 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 PRR23CQ6ZRP0 262 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 EPM2AIP1Q7L775 607 aaPredicted RBP10.13□□□□□ -0.79
BRD3-205ENST00000473349 TRAPPC11Q7Z392 1133 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 LIMS2Q7Z4I7 341 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 WDR5BQ86VZ2 330 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 TMEM86AQ8N2M4 240 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 TOP6BLQ8N6T0 577 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 PLEKHO2Q8TD55 490 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 SH3RF2Q8TEC5 729 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 ZNF516Q92618 1163 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 EXOC4Q96A65 974 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 ANKRD36BP1Q96IX9 119 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 MMS19Q96T76 1030 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 ARRDC1-AS1Q9H2J1 176 aa10.13□□□□□ -0.79
BRD3-205ENST00000473349 ECT2Q9H8V3 914 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms