RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, humanhuman

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18B-208ENST00000472267 LCP1P13796 627 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 PAX3P23760 479 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 PSMA2P25787 234 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 PCSK1P29120 753 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 CTNNA1P35221 906 aaKnown RBP11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 RFC1P35251 1148 aaPredicted RBP11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 BCAR1P56945 870 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 OGDHQ02218 1023 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 AADACL2Q6P093 401 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.35□□□□□ -0.593e-7■■■■■ 56.4
MRPS18B-208ENST00000472267 ZNF572Q7Z3I7 529 aaPredicted RBP11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 NECAB2Q7Z6G3 386 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 NPAS4Q8IUM7 802 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 FUKQ8N0W3 1084 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 EMC1Q8N766 993 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 ACTRT1Q8TDG2 376 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 SLC35F5Q8WV83 523 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 MCRS1Q96EZ8 462 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 SUSD3Q96L08 255 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 RNPC3Q96LT9 517 aaKnown RBP11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 HNRNPABQ99729 332 aaKnown RBP11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.35□□□□□ -0.599e-7■□□□□ 10.7
MRPS18B-208ENST00000472267 B3GNT5Q9BYG0 378 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 RBM12Q9NTZ6 932 aaKnown RBP11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 DSEQ9UL01 958 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 CDH9Q9ULB4 789 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 PCDHA3Q9Y5H8 950 aa11.35□□□□□ -0.59
MRPS18B-208ENST00000472267 ARHGEF37A1IGU5 675 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 MYBPHLA2RUH7 354 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 F8VP50 259 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 HOXA2O43364 376 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 TADA2AO75478 443 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 GRAP2O75791 330 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 FGGP02679 453 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 PEX5P50542 639 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 RWDD2BP57060 319 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 SLC8A3P57103 927 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 SNX16P57768 344 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 TAS2R40P59535 323 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 ZNF252P-AS1Q0IIN9 211 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 IKBKEQ14164 716 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 LONRF2Q1L5Z9 754 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 SEL1L2Q5TEA6 688 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 OVOS1Q6IE37 1185 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 CC2D1AQ6P1N0 951 aaPredicted RBP11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 CNKSR3Q6P9H4 555 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 ADAT2Q7Z6V5 191 aaKnown RBP11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 SCUBE3Q8IX30 993 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 THEM5Q8N1Q8 247 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 RASGEF1CQ8N431 466 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 RTP3Q9BQQ7 232 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 AP1M1Q9BXS5 423 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 DUSP16Q9BY84 665 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 CARD9Q9H257 536 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 NRDE2Q9H7Z3 1164 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 PCDH10Q9P2E7 1040 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 HCSTQ9UBK5 93 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 PCDHB8Q9UN66 801 aa11.34□□□□□ -0.59
MRPS18B-208ENST00000472267 KRIT1O00522 736 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 AP1G2O75843 785 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 GABBR2O75899 941 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 CYP11A1P05108 521 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 FAM200BP0CF97 657 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 PYGMP11217 842 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 MAN1A1P33908 653 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 RABGGTBP53611 331 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 GSCP56915 257 aaPredicted RBP11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 MAP3K7CLP57077 242 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 TUBB4BP68371 445 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 MRPS25P82663 173 aaKnown RBP11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 PIGHQ14442 188 aaPredicted RBP11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 ZFYVE27Q5T4F4 411 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 FAM43BQ6ZT52 329 aaPredicted RBP11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 PAQR9Q6ZVX9 377 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 TMEM110Q86TL2 294 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 RHOT1Q8IXI2 618 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 KLHL7Q8IXQ5 586 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 GPR161Q8N6U8 529 aaKnown RBP11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 STK32AQ8WU08 396 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 PCED1BQ96HM7 432 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 PIWIL1Q96J94 861 aaKnown RBP11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 KRT82Q9NSB4 513 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 LCMT1Q9UIC8 334 aa11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.33□□□□□ -0.6
MRPS18B-208ENST00000472267 TRIM43BA6NCK2 446 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 NRP1O14786 923 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 XPO1O14980 1071 aaKnown RBP11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 PAPSS1O43252 624 aaPredicted RBP11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 BEST1O76090 585 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 ALDH2P05091 517 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 TCF4P15884 667 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 RAG1P15918 1043 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 NPR3P17342 541 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 TYMPP19971 482 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 RFC2P35250 354 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 ACADSBP45954 432 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 SLC11A1P49279 550 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 SLC6A3Q01959 620 aa11.32□□□□□ -0.6
MRPS18B-208ENST00000472267 PLCB3Q01970 1234 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms