RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 ZNF528Q3MIS6 628 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 SCARA5Q6ZMJ2 495 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 MON1AQ86VX9 555 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 CELF5Q8N6W0 485 aaKnown RBP16.41■□□□□ 0.22
COL1A1-203ENST00000471344 FSIP1Q8NA03 581 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 TTC16Q8NEE8 873 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 PARD3BQ8TEW8 1205 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 MRPS31Q92665 395 aaKnown RBP16.41■□□□□ 0.22
COL1A1-203ENST00000471344 TRMT2BQ96GJ1 504 aaKnown RBP16.41■□□□□ 0.22
COL1A1-203ENST00000471344 FUBP3Q96I24 572 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL1A1-203ENST00000471344 CYP2S1Q96SQ9 504 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 GKN1Q9NS71 199 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 CGNQ9P2M7 1197 aaKnown RBP16.41■□□□□ 0.22
COL1A1-203ENST00000471344 MAGEC2Q9UBF1 373 aaPredicted RBP16.41■□□□□ 0.22
COL1A1-203ENST00000471344 OTOGLQ3ZCN5 2332 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 FAM237AA0A1B0GTK4 181 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 CLDN5O00501 218 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 GNL1P36915 607 aaPredicted RBP16.4■□□□□ 0.22
COL1A1-203ENST00000471344 MAGEA11P43364 429 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 CDH8P55286 799 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 TNNC1P63316 161 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 SATB1Q01826 763 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 BIRC3Q13489 604 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 NAIF1Q69YI7 327 aaPredicted RBP16.4■□□□□ 0.22
COL1A1-203ENST00000471344 ZC3H14Q6PJT7 736 aaKnown RBP16.4■□□□□ 0.22
COL1A1-203ENST00000471344 C4orf50Q6ZRC1 276 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 DCLK2Q8N568 766 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 SUMF1Q8NBK3 374 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 OR6B3Q8NGW1 331 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 MYCBPAPQ8TBZ2 947 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 NELL1Q92832 810 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 MYRFLQ96LU7 910 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 ZNF518BQ9C0D4 1074 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 SDCBP2Q9H190 292 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 SNX25Q9H3E2 840 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 EBF3Q9H4W6 596 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 C8orf33Q9H7E9 229 aaPredicted RBP16.4■□□□□ 0.22
COL1A1-203ENST00000471344 TDP1Q9NUW8 608 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 MAPK8IP1Q9UQF2 711 aa16.4■□□□□ 0.22
COL1A1-203ENST00000471344 HELZP42694 1942 aaKnown RBP16.4■□□□□ 0.22
COL1A1-203ENST00000471344 PHACTR2O75167 634 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 TACC1O75410 805 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 NR3C1P04150 777 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 DDX6P26196 483 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL1A1-203ENST00000471344 GRIK1P39086 918 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 DMWDQ09019 674 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 DPYDQ12882 1025 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 TRPC3Q13507 836 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 C1orf220Q5T0J3 134 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 ARL14EPQ8N8R7 260 aaPredicted RBP16.39■□□□□ 0.21
COL1A1-203ENST00000471344 ZBTB44Q8NCP5 570 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 GOLGA5Q8TBA6 731 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 FAM83CQ9BQN1 747 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL1A1-203ENST00000471344 UXTQ9UBK9 157 aaPredicted RBP16.39■□□□□ 0.21
COL1A1-203ENST00000471344 USP25Q9UHP3 1055 aa16.39■□□□□ 0.21
COL1A1-203ENST00000471344 F8VP50 259 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 KINO60870 393 aaKnown RBP16.38■□□□□ 0.21
COL1A1-203ENST00000471344 CLSTN1O94985 981 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 STAU1O95793 577 aaKnown RBP16.38■□□□□ 0.21
COL1A1-203ENST00000471344 C4BPAP04003 597 aaKnown RBP16.38■□□□□ 0.21
COL1A1-203ENST00000471344 PTPN1P18031 435 aaKnown RBP16.38■□□□□ 0.21
COL1A1-203ENST00000471344 MLLT6P55198 1093 aaPredicted RBP16.38■□□□□ 0.21
COL1A1-203ENST00000471344 CLDN10P78369 228 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 PLCB2Q00722 1185 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 PSMD2Q13200 908 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 ORC1Q13415 861 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 NCOA4Q13772 614 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 ZNF77Q15935 545 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 ZNF699Q32M78 642 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 ITPRIPL2Q3MIP1 535 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 CEP135Q66GS9 1140 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 PKN3Q6P5Z2 889 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 VSTM1Q6UX27 236 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 KRBA2Q6ZNG9 492 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 RALGPS2Q86X27 583 aaPredicted RBP16.38■□□□□ 0.21
COL1A1-203ENST00000471344 SLC9A9Q8IVB4 645 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 SPATA17Q96L03 361 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 B3GNT5Q9BYG0 378 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 SEMA4AQ9H3S1 761 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 ZSCAN32Q9NX65 697 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 GCNT4Q9P109 453 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 HMGXB4Q9UGU5 601 aa16.38■□□□□ 0.21
COL1A1-203ENST00000471344 A8MXQ7 604 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 PDXKO00764 312 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 LILRB5O75023 590 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 CKMP06732 381 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 ATICP31939 592 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 ZXDBP98169 803 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 USP4Q13107 963 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 RUNX3Q13761 415 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 CCINQ13939 588 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 SPOPLQ6IQ16 392 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 B3GALNT2Q8NCR0 500 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 SYAP1Q96A49 352 aaPredicted RBP16.37■□□□□ 0.21
COL1A1-203ENST00000471344 MSANTD3Q96H12 275 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 KIF9Q9HAQ2 790 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 THG1LQ9NWX6 298 aaKnown RBP16.37■□□□□ 0.21
COL1A1-203ENST00000471344 PCDHGA2Q9Y5H1 932 aa16.37■□□□□ 0.21
COL1A1-203ENST00000471344 WNT6Q9Y6F9 365 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms