RNA–Protein interactions for RNA: ENST00000469882.5

FXR1-208, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-208	ENST00000469882	TMEM30A	Q9NV96	361 aa		12.03	□□□□□ -0.48
FXR1-208	ENST00000469882	SPATA6	Q9NWH7	488 aa	Predicted RBP	12.03	□□□□□ -0.48
FXR1-208	ENST00000469882	MAGEC2	Q9UBF1	373 aa	Predicted RBP	12.03	□□□□□ -0.48
FXR1-208	ENST00000469882	TRAF3IP3	Q9Y228	551 aa		12.03	□□□□□ -0.48
FXR1-208	ENST00000469882	MRPS17	Q9Y2R5	130 aa	Known RBP	12.03	□□□□□ -0.48
FXR1-208	ENST00000469882		R4GN57	208 aa		12.03	□□□□□ -0.48
FXR1-208	ENST00000469882	DCHS1	Q96JQ0	3298 aa		12.03	□□□□□ -0.48
FXR1-208	ENST00000469882	HELZ	P42694	1942 aa	Known RBP	12.03	□□□□□ -0.48
FXR1-208	ENST00000469882	CLDN5	O00501	218 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	MAN2B1	O00754	1011 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	AKAP3	O75969	853 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	CLSTN1	O94985	981 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	TRIM49	P0CI25	452 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	TRIM49C	P0CI26	452 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	PTPN1	P18031	435 aa	Known RBP	12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	NR2F2	P24468	414 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	CCNE1	P24864	410 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	AVPR1A	P37288	418 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	MAGEA9	P43362	315 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	RPS9	P46781	194 aa	Known RBP	12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	KPNA1	P52294	538 aa	Predicted RBP	12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	AP3M2	P53677	418 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	CDH8	P55286	799 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	USP46	P62068	366 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	MAPRE1	Q15691	268 aa	Known RBP	12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	NFIL3	Q16649	462 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	ZACN	Q401N2	412 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	ZCWPW2	Q504Y3	356 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	ARHGAP29	Q52LW3	1261 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	WDR44	Q5JSH3	913 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	TXNDC11	Q6PKC3	985 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	VSTM1	Q6UX27	236 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	MON1A	Q86VX9	555 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	GUF1	Q8N442	669 aa	Known RBP	12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	CELF5	Q8N6W0	485 aa	Known RBP	12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	B3GALNT2	Q8NCR0	500 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	TMC2	Q8TDI7	906 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	BPIFB1	Q8TDL5	484 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	MRPS31	Q92665	395 aa	Known RBP	12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	CCDC47	Q96A33	483 aa	Known RBP	12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	SPATA17	Q96L03	361 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	SLC22A12	Q96S37	553 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	NELL2	Q99435	816 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	GTSE1	Q9NYZ3	720 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	UXT	Q9UBK9	157 aa	Predicted RBP	12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	FRMD4B	Q9Y2L6	1034 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	ZNF292	O60281	2723 aa		12.02	□□□□□ -0.49
FXR1-208	ENST00000469882	C2orf78	A6NCI8	922 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882		A8MXQ7	604 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882		F8VP50	259 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	SPECC1L-ADORA2A	F8WAN1	911 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	TRIM66	O15016	1216 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	KIF20A	O95235	890 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	FAM163B	P0C2L3	166 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	CTH	P32929	405 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	GRIK1	P39086	918 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	NUCB2	P80303	420 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	MTAP	Q13126	283 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	ZNF667	Q5HYK9	610 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	SPOPL	Q6IQ16	392 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	SV2A	Q7L0J3	742 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	ENGASE	Q8NFI3	743 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	NKD2	Q969F2	451 aa	Predicted RBP	12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	CYP2S1	Q96SQ9	504 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	B3GNT5	Q9BYG0	378 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	ZNF518B	Q9C0D4	1074 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	TRPC7	Q9HCX4	862 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	PRMT8	Q9NR22	394 aa	Predicted RBP	12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	TDP1	Q9NUW8	608 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	HMGXB4	Q9UGU5	601 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	ZMYM5	Q9UJ78	669 aa		12.01	□□□□□ -0.49
FXR1-208	ENST00000469882	OTOL1	A6NHN0	477 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-208	ENST00000469882	SOBP	A7XYQ1	873 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	MAPK13	O15264	365 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	NCAM2	O15394	837 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	LAMTOR5	O43504	91 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	HLA-DRA	P01903	254 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	CHRNB1	P11230	501 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	ANXA13	P27216	316 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	PIK3CA	P42336	1068 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	ASPA	P45381	313 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	VAMP7	P51809	220 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	MLLT6	P55198	1093 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-208	ENST00000469882	PLCB2	Q00722	1185 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	CSTF1	Q05048	431 aa	Known RBP	12	□□□□□ -0.49
FXR1-208	ENST00000469882	PPP3CA	Q08209	521 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	ORC1	Q13415	861 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	ZNF268	Q14587	947 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-208	ENST00000469882	TRIM68	Q6AZZ1	485 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	TSSK4	Q6SA08	328 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	DENND5B	Q6ZUT9	1274 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	FAM186B	Q8IYM0	893 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	ERCC4	Q92889	916 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-208	ENST00000469882	CHFR	Q96EP1	664 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	EEF2KMT	Q96G04	330 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	MSANTD3	Q96H12	275 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	C8orf48	Q96LL4	319 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	FAM83C	Q9BQN1	747 aa		12	□□□□□ -0.49
FXR1-208	ENST00000469882	TTLL2	Q9BWV7	592 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms