RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 CCINQ13939 588 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 LRRC32Q14392 662 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 MAPRE1Q15691 268 aaKnown RBP17.43■□□□□ 0.38
COL9A3-208ENST00000469802 KMT5BQ4FZB7 885 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 VSTM1Q6UX27 236 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 SLC9A9Q8IVB4 645 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 MYCBPAPQ8TBZ2 947 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 CHFRQ96EP1 664 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 PCED1BQ96HM7 432 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 SPATA17Q96L03 361 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 EPC1Q9H2F5 836 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 KCTD10Q9H3F6 313 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 VRTNQ9H8Y1 702 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 HPS4Q9NQG7 708 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 TDP1Q9NUW8 608 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 EXOC1Q9NV70 894 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 DMAC2Q9NW81 257 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 THG1LQ9NWX6 298 aaKnown RBP17.43■□□□□ 0.38
COL9A3-208ENST00000469802 MYH10P35580 1976 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 EXOC3O60645 756 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 PAPSS2O95340 614 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-208ENST00000469802 CASP4P49662 377 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 MYL6P60660 151 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 KRT85P78386 507 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 USP4Q13107 963 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 PSMD2Q13200 908 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 ITPRIPL2Q3MIP1 535 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 WDR72Q3MJ13 1102 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 DGKKQ5KSL6 1271 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 SCN4BQ8IWT1 228 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 SPEM1Q8N4L4 309 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 TTC8Q8TAM2 541 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 PARD3BQ8TEW8 1205 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 ATRIPQ8WXE1 791 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 RUBCNQ92622 972 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 SPATA32Q96LK8 384 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 MMS19Q96T76 1030 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 RBM12Q9NTZ6 932 aaKnown RBP17.42■□□□□ 0.38
COL9A3-208ENST00000469802 MAGEC2Q9UBF1 373 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-208ENST00000469802 CACNA1AO00555 2505 aa17.42■□□□□ 0.38
COL9A3-208ENST00000469802 OTOL1A6NHN0 477 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-208ENST00000469802 PDGFRBP09619 1106 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 BDNFP23560 247 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 ATICP31939 592 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 TNNC1P63316 161 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 SATB1Q01826 763 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 FAM160A1Q05DH4 1040 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 PON2Q15165 354 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 ZNF77Q15935 545 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 TDRD10Q5VZ19 366 aaKnown RBP17.41■□□□□ 0.38
COL9A3-208ENST00000469802 Q6ZS52 159 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 SLC22A12Q96S37 553 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 TTLL2Q9BWV7 592 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 GKN1Q9NS71 199 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 GCNT4Q9P109 453 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 CEP250Q9BV73 2442 aa17.41■□□□□ 0.38
COL9A3-208ENST00000469802 ATG2BQ96BY7 2078 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 LRRIQ3A6PVS8 624 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-208ENST00000469802 PDXKO00764 312 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 TCF3P15923 654 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 GNL1P36915 607 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-208ENST00000469802 AP3M2P53677 418 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 USP46P62068 366 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 CYP27A1Q02318 531 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 TRPC3Q13507 836 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 RUNX3Q13761 415 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 PPP2R5DQ14738 602 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 MDH1BQ5I0G3 518 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 TRIM68Q6AZZ1 485 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 SYNPOQ8N3V7 929 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 SYAP1Q96A49 352 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-208ENST00000469802 SNX25Q9H3E2 840 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 DPEP3Q9H4B8 488 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 TMEM30AQ9NV96 361 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 SMG5Q9UPR3 1016 aaKnown RBP17.4■□□□□ 0.38
COL9A3-208ENST00000469802 GTF3C3Q9Y5Q9 886 aa17.4■□□□□ 0.38
COL9A3-208ENST00000469802 SPAG17Q6Q759 2223 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 TRAV19A0A0A6YYK7 116 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 C2orf78A6NCI8 922 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 K7ESF4 209 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 TRIM66O15016 1216 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 C4BPAP04003 597 aaKnown RBP17.39■□□□□ 0.37
COL9A3-208ENST00000469802 NR3C1P04150 777 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 USP17L7P0C7H9 530 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 GRIK1P39086 918 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 SYKP43405 635 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 CXCL12P48061 93 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 NDUFA8P51970 172 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 NRLP54845 237 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 NOP14P78316 857 aaKnown RBP17.39■□□□□ 0.37
COL9A3-208ENST00000469802 MTF1Q14872 753 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 TMEM196Q5HYL7 178 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 DENND5BQ6ZUT9 1274 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 FSIP1Q8NA03 581 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 OR6B3Q8NGW1 331 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 C8orf48Q96LL4 319 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 ELOVL4Q9GZR5 314 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 EBF3Q9H4W6 596 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 SMYD3Q9H7B4 428 aa17.39■□□□□ 0.37
COL9A3-208ENST00000469802 TRPC7Q9HCX4 862 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms