RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RSPH1Q8WYR4 309 aa20■□□□□ 0.79
SMC4-209ENST00000468653 MED10Q9BTT4 135 aa20■□□□□ 0.79
SMC4-209ENST00000468653 PLVAPQ9BX97 442 aa20■□□□□ 0.79
SMC4-209ENST00000468653 CDH9Q9ULB4 789 aa20■□□□□ 0.79
SMC4-209ENST00000468653 PYGMP11217 842 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 PSMA2P25787 234 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 TKTP29401 623 aaKnown RBP19.99■□□□□ 0.79
SMC4-209ENST00000468653 OGDHQ02218 1023 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 ZNF252P-AS1Q0IIN9 211 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 TCTN1Q2MV58 587 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 DAB2IPQ5VWQ8 1189 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 FAM183BPQ6ZVS7 135 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 TMEM110Q86TL2 294 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 COLGALT2Q8IYK4 626 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 JOSD2Q8TAC2 188 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 SUSD3Q96L08 255 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 AP1M1Q9BXS5 423 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 TMEM39AQ9NV64 488 aa19.99■□□□□ 0.79
SMC4-209ENST00000468653 M0QZQ0 153 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 PSTPIP1O43586 416 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 CYP11A1P05108 521 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 OR1G1P47890 313 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 KIAA0319Q5VV43 1072 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 AADACL2Q6P093 401 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 CC2D1AQ6P1N0 951 aaPredicted RBP19.98■□□□□ 0.79
SMC4-209ENST00000468653 FUKQ8N0W3 1084 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 C11orf49Q9H6J7 331 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 CRTAC1Q9NQ79 661 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 ARGLU1Q9NWB6 273 aaPredicted RBP19.98■□□□□ 0.79
SMC4-209ENST00000468653 TMEM59LQ9UK28 342 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 F8VP50 259 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 CLDN5O00501 218 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 HOXA2O43364 376 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 B4GALT3O60512 393 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 ITGB1P05556 798 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 TAS2R40P59535 323 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 RBM10P98175 930 aaKnown RBP19.98■□□□□ 0.79
SMC4-209ENST00000468653 CCDC142Q17RM4 750 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 EMC1Q8N766 993 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 NIPA2Q8N8Q9 360 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 FNIP1Q8TF40 1166 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 PAWRQ96IZ0 340 aaKnown RBP19.98■□□□□ 0.79
SMC4-209ENST00000468653 LRRC1Q9BTT6 524 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 DUSP16Q9BY84 665 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 TBX21Q9UL17 535 aa19.98■□□□□ 0.79
SMC4-209ENST00000468653 F8W810 466 aa19.97■□□□□ 0.79
SMC4-209ENST00000468653 GJC1P36383 396 aa19.97■□□□□ 0.79
SMC4-209ENST00000468653 ACADSBP45954 432 aa19.97■□□□□ 0.79
SMC4-209ENST00000468653 CTCFP49711 727 aaPredicted RBP19.97■□□□□ 0.79
SMC4-209ENST00000468653 C8orf74Q6P047 294 aa19.97■□□□□ 0.79
SMC4-209ENST00000468653 FBXO38Q6PIJ6 1188 aa19.97■□□□□ 0.79
SMC4-209ENST00000468653 ZDHHC17Q8IUH5 632 aa19.97■□□□□ 0.79
SMC4-209ENST00000468653 THEM5Q8N1Q8 247 aa19.97■□□□□ 0.79
SMC4-209ENST00000468653 KRT12Q99456 494 aa19.97■□□□□ 0.79
SMC4-209ENST00000468653 CYLDQ9NQC7 956 aa19.97■□□□□ 0.79
SMC4-209ENST00000468653 TET1Q8NFU7 2136 aa19.97■□□□□ 0.79
SMC4-209ENST00000468653 GOLGA6L10A0A0M3HER8 536 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 CCDC188H7C350 402 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 XPO1O14980 1071 aaKnown RBP19.96■□□□□ 0.79
SMC4-209ENST00000468653 CAPN15O75808 1086 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 TUBBP07437 444 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 CLTBP09497 229 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 H2AFXP16104 143 aaPredicted RBP19.96■□□□□ 0.79
SMC4-209ENST00000468653 NPR3P17342 541 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 PLA2G4AP47712 749 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 PLCB3Q01970 1234 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 OVOS1Q6IE37 1185 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 ADAT2Q7Z6V5 191 aaKnown RBP19.96■□□□□ 0.79
SMC4-209ENST00000468653 SCUBE3Q8IX30 993 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 KLHL7Q8IXQ5 586 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 HSFY1Q96LI6 401 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 CASD1Q96PB1 797 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 PNKPQ96T60 521 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 ACBD6Q9BR61 282 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 B3GNT5Q9BYG0 378 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 DNAJB4Q9UDY4 337 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 PCDHB8Q9UN66 801 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 PRG3Q9Y2Y8 225 aaPredicted RBP19.96■□□□□ 0.79
SMC4-209ENST00000468653 SCN5AQ14524 2016 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 TANC1Q9C0D5 1861 aa19.96■□□□□ 0.79
SMC4-209ENST00000468653 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.95■□□□□ 0.78
SMC4-209ENST00000468653 TARSL2A2RTX5 802 aaKnown RBP19.95■□□□□ 0.78
SMC4-209ENST00000468653 MYBPHLA2RUH7 354 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 TMEM189-UBE2V1I3L0A0 370 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 FAM200BP0CF97 657 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 LCP1P13796 627 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 TYMPP19971 482 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 GATMP50440 423 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 SLC6A3Q01959 620 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 GLE1Q53GS7 698 aaKnown RBP19.95■□□□□ 0.78
SMC4-209ENST00000468653 OLFML1Q6UWY5 402 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 PAQR9Q6ZVX9 377 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 NPAS4Q8IUM7 802 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 MYCBPAPQ8TBZ2 947 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 RTP3Q9BQQ7 232 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 PAPSS1O43252 624 aaPredicted RBP19.95■□□□□ 0.78
SMC4-209ENST00000468653 TRAPPC3O43617 180 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 GABBR2O75899 941 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 CDR1P51861 262 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 ZFYVE27Q5T4F4 411 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms