RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ITIH3Q06033 890 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 FAM183BPQ6ZVS7 135 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 CRIPAKQ8N1N5 446 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 PIWIL1Q96J94 861 aaKnown RBP21.7■■□□□ 1.06
TMEM53-207ENST00000468117 RNPC3Q96LT9 517 aaKnown RBP21.7■■□□□ 1.06
TMEM53-207ENST00000468117 CASD1Q96PB1 797 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 HNRNPABQ99729 332 aaKnown RBP21.7■■□□□ 1.06
TMEM53-207ENST00000468117 RHOXF2Q9BQY4 288 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.7■■□□□ 1.06
TMEM53-207ENST00000468117 SLC4A5Q9BY07 1137 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 PRG3Q9Y2Y8 225 aaPredicted RBP21.7■■□□□ 1.06
TMEM53-207ENST00000468117 GABBR2O75899 941 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 CYP11A1P05108 521 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 FAM102AQ5T9C2 384 aaPredicted RBP21.7■■□□□ 1.06
TMEM53-207ENST00000468117 OR6B2Q6IFH4 312 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 PAQR9Q6ZVX9 377 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 EMC1Q8N766 993 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 SUSD3Q96L08 255 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 RTP3Q9BQQ7 232 aa21.7■■□□□ 1.06
TMEM53-207ENST00000468117 MYBPHLA2RUH7 354 aa21.69■■□□□ 1.06
TMEM53-207ENST00000468117 F8VP50 259 aa21.69■■□□□ 1.06
TMEM53-207ENST00000468117 TUBB4BP68371 445 aa21.69■■□□□ 1.06
TMEM53-207ENST00000468117 TMEM110Q86TL2 294 aa21.69■■□□□ 1.06
TMEM53-207ENST00000468117 METTL23Q86XA0 190 aa21.69■■□□□ 1.06
TMEM53-207ENST00000468117 SCUBE3Q8IX30 993 aa21.69■■□□□ 1.06
TMEM53-207ENST00000468117 GPR161Q8N6U8 529 aaKnown RBP21.69■■□□□ 1.06
TMEM53-207ENST00000468117 STK32AQ8WU08 396 aa21.69■■□□□ 1.06
TMEM53-207ENST00000468117 UBE2Q2Q8WVN8 375 aa21.69■■□□□ 1.06
TMEM53-207ENST00000468117 CDH9Q9ULB4 789 aa21.69■■□□□ 1.06
TMEM53-207ENST00000468117 LAMA2P24043 3122 aaKnown RBP21.69■■□□□ 1.06
TMEM53-207ENST00000468117 VWA8A3KMH1 1905 aa21.69■■□□□ 1.06
TMEM53-207ENST00000468117 FGGP02679 453 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 PYGMP11217 842 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 PAX3P23760 479 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 MAN1A1P33908 653 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 SSR1P43307 286 aaKnown RBP21.68■■□□□ 1.06
TMEM53-207ENST00000468117 TAS2R40P59535 323 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 FAM43BQ6ZT52 329 aaPredicted RBP21.68■■□□□ 1.06
TMEM53-207ENST00000468117 ANKRD7Q92527 254 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 VWCEQ96DN2 955 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 MED10Q9BTT4 135 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 B3GNT5Q9BYG0 378 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 MIS12Q9H081 205 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 NRDE2Q9H7Z3 1164 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 ANKZF1Q9H8Y5 726 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 PCDH10Q9P2E7 1040 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 HCSTQ9UBK5 93 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 DSEQ9UL01 958 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 PCSK1P29120 753 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 RWDD2BP57060 319 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.68■■□□□ 1.06
TMEM53-207ENST00000468117 NPAS4Q8IUM7 802 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 PCED1BQ96HM7 432 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 TMEM106CQ9BVX2 250 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 AP1M1Q9BXS5 423 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 DUSP16Q9BY84 665 aa21.68■■□□□ 1.06
TMEM53-207ENST00000468117 PAPSS1O43252 624 aaPredicted RBP21.67■■□□□ 1.06
TMEM53-207ENST00000468117 BEST1O76090 585 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 TCF4P15884 667 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 PIGHQ14442 188 aaPredicted RBP21.67■■□□□ 1.06
TMEM53-207ENST00000468117 OVOS1Q6IE37 1185 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 NECAB2Q7Z6G3 386 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 PRDM5Q9NQX1 630 aaPredicted RBP21.67■■□□□ 1.06
TMEM53-207ENST00000468117 TTC7AQ9ULT0 858 aaPredicted RBP21.67■■□□□ 1.06
TMEM53-207ENST00000468117 TMEM189-UBE2V1I3L0A0 370 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 GRAP2O75791 330 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 NPR3P17342 541 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 PSMA2P25787 234 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 ITGB8P26012 769 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 PLCB3Q01970 1234 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 CC2D1AQ6P1N0 951 aaPredicted RBP21.67■■□□□ 1.06
TMEM53-207ENST00000468117 OLFML1Q6UWY5 402 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 MMGT1Q8N4V1 131 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 MYCBPAPQ8TBZ2 947 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 SPATA18Q8TC71 538 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 ACBD6Q9BR61 282 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 TMEM59LQ9UK28 342 aa21.67■■□□□ 1.06
TMEM53-207ENST00000468117 PTPRDP23468 1912 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 XPO1O14980 1071 aaKnown RBP21.66■■□□□ 1.06
TMEM53-207ENST00000468117 HOXA2O43364 376 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 UPP2O95045 317 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 LCP1P13796 627 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 GJC1P36383 396 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 PLA2G4AP47712 749 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 IKBKEQ14164 716 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 TAF5Q15542 800 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 LONRF2Q1L5Z9 754 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 CNKSR3Q6P9H4 555 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 CLEC20AQ6ZU45 233 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 ADAT2Q7Z6V5 191 aaKnown RBP21.66■■□□□ 1.06
TMEM53-207ENST00000468117 PIGZQ86VD9 579 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 RHOT1Q8IXI2 618 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 NIPA2Q8N8Q9 360 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 OR10T2Q8NGX3 314 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 FNIP1Q8TF40 1166 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 KRT82Q9NSB4 513 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 LCMT1Q9UIC8 334 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 PCDHB8Q9UN66 801 aa21.66■■□□□ 1.06
TMEM53-207ENST00000468117 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.66■■□□□ 1.06
TMEM53-207ENST00000468117 NLRC5Q86WI3 1866 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms