RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 PI4K2AQ9BTU6 479 aa15.9■□□□□ 0.14
HMGXB4-206ENST00000466438 TMEM134Q9H6X4 195 aa15.9■□□□□ 0.14
HMGXB4-206ENST00000466438 IGSF5Q9NSI5 407 aa15.9■□□□□ 0.14
HMGXB4-206ENST00000466438 LIMCH1Q9UPQ0 1083 aa15.9■□□□□ 0.14
HMGXB4-206ENST00000466438 TEX51A0A1B0GUA7 166 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 ADAM23O75077 832 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 MED24O75448 989 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 TADA3O75528 432 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 CKMP06732 381 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 CSH1P0DML2 217 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 CSH2P0DML3 217 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 CDR1P51861 262 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 SPAG1Q07617 926 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 SCRN1Q12765 414 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 ZBTB6Q15916 424 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 LRRC69Q6ZNQ3 347 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 TRIML1Q8N9V2 468 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 SENP8Q96LD8 212 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 LINC00597Q9H2U6 94 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 PLEKHA5Q9HAU0 1116 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 POLD4Q9HCU8 107 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 UBQLN1Q9UMX0 589 aaKnown RBP15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 MAGED2Q9UNF1 606 aaPredicted RBP15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 MUC22E2RYF6 1773 aaPredicted RBP15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 STK36Q9NRP7 1315 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 PTPRQQ9UMZ3 2332 aa15.89■□□□□ 0.13
HMGXB4-206ENST00000466438 GOLGA4Q13439 2230 aaKnown RBP15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 TRAV19A0A0A6YYK7 116 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 IGHV1OR15-9A0A0B4J2B8 117 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 FAM205CA6NFA0 338 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 CYP11A1P05108 521 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 ATXN1LP0C7T5 689 aaKnown RBP15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 GNSP15586 552 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 TCF3P15923 654 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 PAX3P23760 479 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 KIR2DL1P43626 348 aaPredicted RBP15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 LILRA4P59901 499 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 NOLC1Q14978 699 aaKnown RBP eCLIP15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 SEZ6Q53EL9 994 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 CPLX2Q6PUV4 134 aaKnown RBP15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 TAS1R3Q7RTX0 852 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 SFTPA1Q8IWL2 248 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 SPATA18Q8TC71 538 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 SH3RF2Q8TEC5 729 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 SLC22A12Q96S37 553 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 CYP2S1Q96SQ9 504 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 CDC6Q99741 560 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 TRPC7Q9HCX4 862 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 ABI2Q9NYB9 513 aaPredicted RBP15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 CALCOCO1Q9P1Z2 691 aa15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 UXTQ9UBK9 157 aaPredicted RBP15.88■□□□□ 0.13
HMGXB4-206ENST00000466438 FAM149AA5PLN7 773 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 MYMKA6NI61 221 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 CCDC169A6NNP5 214 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 NEMFO60524 1076 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 KAT7O95251 611 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 APODP05090 189 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 ZNF883P0CG24 379 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 CXCL8P10145 99 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 HLA-EP13747 358 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 XBP1P17861 261 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 EIF2S3P41091 472 aaKnown RBP15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 EIF2DP41214 584 aaKnown RBP15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 NPTX2P47972 431 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 GPR155Q7Z3F1 870 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 RGL4Q8IZJ4 473 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 TMX3Q96JJ7 454 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 MTMR9Q96QG7 549 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 PNKPQ96T60 521 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 ARHGAP28Q9P2N2 729 aa15.87■□□□□ 0.13
HMGXB4-206ENST00000466438 TTC26A0AVF1 554 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 PPEF2O14830 753 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 XPOTO43592 962 aaKnown RBP15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 ZNF217O75362 1048 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 TOM1L1O75674 476 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 GABRG2P18507 467 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 GUCY2FP51841 1108 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 PEX3P56589 373 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 KCNC4Q03721 635 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 MESP2Q0VG99 397 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 SMAD1Q15797 465 aaKnown RBP15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 SYCP2LQ5T4T6 812 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 EMC10Q5UCC4 262 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 PCSK4Q6UW60 755 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 LRRTM3Q86VH5 581 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 STKLD1Q8NE28 680 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 TRMT2BQ96GJ1 504 aaKnown RBP15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 ZNF419Q96HQ0 510 aaPredicted RBP15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 ZBTB45Q96K62 511 aaPredicted RBP15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 PRDM16Q9HAZ2 1276 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 DSEQ9UL01 958 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 ATMQ13315 3056 aa15.86■□□□□ 0.13
HMGXB4-206ENST00000466438 A0A0A0MRY4 1105 aa15.85■□□□□ 0.13
HMGXB4-206ENST00000466438 RRP8O43159 456 aaKnown RBP15.85■□□□□ 0.13
HMGXB4-206ENST00000466438 CYP17A1P05093 508 aa15.85■□□□□ 0.13
HMGXB4-206ENST00000466438 RPA1P27694 616 aa15.85■□□□□ 0.13
HMGXB4-206ENST00000466438 ZC2HC1CQ53FD0 456 aaPredicted RBP15.85■□□□□ 0.13
HMGXB4-206ENST00000466438 ARL14EPQ8N8R7 260 aaPredicted RBP15.85■□□□□ 0.13
HMGXB4-206ENST00000466438 NXPE2Q96DL1 559 aa15.85■□□□□ 0.13
HMGXB4-206ENST00000466438 INTS4Q96HW7 963 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms