RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 DUSP16Q9BY84 665 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 OXCT2Q9BYC2 517 aaPredicted RBP12.82□□□□□ -0.36
VPS16-206ENST00000466415 B3GNT5Q9BYG0 378 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 PARVAQ9NVD7 372 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 WDR35Q9P2L0 1181 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 STK39Q9UEW8 545 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 CAPN6Q9Y6Q1 641 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 CTAGE9A4FU28 777 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 GOLGA8SH3BPF8 625 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 XPO1O14980 1071 aaKnown RBP12.81□□□□□ -0.36
VPS16-206ENST00000466415 PALMO75781 387 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 URODP06132 367 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 MAGEA10P43363 369 aaPredicted RBP12.81□□□□□ -0.36
VPS16-206ENST00000466415 ACADSBP45954 432 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 ARPP19P56211 112 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 PTP4A2Q12974 167 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 PSMD5Q16401 504 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 NFE2Q16621 373 aaPredicted RBP12.81□□□□□ -0.36
VPS16-206ENST00000466415 SLC39A12Q504Y0 691 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 PKDCCQ504Y2 493 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 RTP2Q5QGT7 225 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 OR6B2Q6IFH4 312 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 FAM171BQ6P995 826 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 DCUN1D2Q6PH85 259 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 C3orf20Q8ND61 904 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 TPCN2Q8NHX9 752 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 RIN2Q8WYP3 895 aaPredicted RBP12.81□□□□□ -0.36
VPS16-206ENST00000466415 B3GALT6Q96L58 329 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 TMEM209Q96SK2 561 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 CPXM1Q96SM3 734 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 NAPGQ99747 312 aaPredicted RBP12.81□□□□□ -0.36
VPS16-206ENST00000466415 ZCWPW1Q9H0M4 648 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 OSGEPQ9NPF4 335 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 CYTH4Q9UIA0 394 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 SALL4Q9UJQ4 1053 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 ANAPC7Q9UJX3 599 aa12.81□□□□□ -0.36
VPS16-206ENST00000466415 PTPRSQ13332 1948 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 GRID2IPA4D2P6 1211 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 TMEM110-MUSTN1A8MSY1 372 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 E5RJQ4 531 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 SOD2P04179 222 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 ERBB2P04626 1255 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 OR4Q2P0C623 313 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 CA8P35219 290 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 PLA2G4AP47712 749 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 GLUD2P49448 558 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 HADHBP55084 474 aaKnown RBP12.8□□□□□ -0.36
VPS16-206ENST00000466415 MAP3K7CLP57077 242 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 TAP1Q03518 808 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 KRT17Q04695 432 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 TCEAL1Q15170 157 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 DAAM2Q86T65 1068 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 STK32AQ8WU08 396 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 HSFY1Q96LI6 401 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 WDR24Q96S15 920 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 LRRC4Q9HBW1 653 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 DMAP1Q9NPF5 467 aaPredicted RBP12.8□□□□□ -0.36
VPS16-206ENST00000466415 CYLDQ9NQC7 956 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 ABI2Q9NYB9 513 aaPredicted RBP12.8□□□□□ -0.36
VPS16-206ENST00000466415 CHORDC1Q9UHD1 332 aaPredicted RBP12.8□□□□□ -0.36
VPS16-206ENST00000466415 LCMT1Q9UIC8 334 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 RWDD3Q9Y3V2 267 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 PCDHB5Q9Y5E4 795 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 PCDHGC5Q9Y5F6 944 aa12.8□□□□□ -0.36
VPS16-206ENST00000466415 TULP2O00295 520 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 PIK3R2O00459 728 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 C2CD2LO14523 706 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 MTA2O94776 668 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 LCP1P13796 627 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 BDNFP23560 247 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 CTNNB1P35222 781 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 GABRB2P47870 512 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 CDR1P51861 262 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 GSCP56915 257 aaPredicted RBP12.79□□□□□ -0.36
VPS16-206ENST00000466415 SMARCB1Q12824 385 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 MRPL58Q14197 206 aaKnown RBP12.79□□□□□ -0.36
VPS16-206ENST00000466415 ZNF268Q14587 947 aaPredicted RBP12.79□□□□□ -0.36
VPS16-206ENST00000466415 MESDQ14696 234 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 FAM102AQ5T9C2 384 aaPredicted RBP12.79□□□□□ -0.36
VPS16-206ENST00000466415 PLEKHA7Q6IQ23 1121 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 C11orf63Q6NUN7 778 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 PMF1Q6P1K2 205 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 LLGL2Q6P1M3 1020 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 PRSS55Q6UWB4 352 aaPredicted RBP12.79□□□□□ -0.36
VPS16-206ENST00000466415 CLEC20AQ6ZU45 233 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 FAM183BPQ6ZVS7 135 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 PAQR9Q6ZVX9 377 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 TAS1R1Q7RTX1 841 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 DDX53Q86TM3 631 aaKnown RBP12.79□□□□□ -0.36
VPS16-206ENST00000466415 PIGZQ86VD9 579 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 XYLT1Q86Y38 959 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 ZDHHC17Q8IUH5 632 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 SIX6OS1Q8N1H7 587 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 FEZF2Q8TBJ5 459 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
VPS16-206ENST00000466415 SLC35F5Q8WV83 523 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 PIK3R5Q8WYR1 880 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 FUBP3Q96I24 572 aaKnown RBP eCLIP12.79□□□□□ -0.36
VPS16-206ENST00000466415 MCEEQ96PE7 176 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 PKMYT1Q99640 499 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms