RNA–Protein interactions for RNA: ENST00000465780.1

RBBP4-209, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-209ENST00000465780 MOSPD3O75425 235 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 NOL4O94818 638 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 MYL4P12829 197 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 HMGA1P17096 107 aaKnown RBP11.33□□□□□ -0.6
RBBP4-209ENST00000465780 BDNFP23560 247 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 CDC25CP30307 473 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 CCR2P41597 374 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 CYP27A1Q02318 531 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 CUL2Q13617 745 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 TAF12Q16514 161 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 CCDC142Q17RM4 750 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 KLHL40Q2TBA0 621 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 MTSS1LQ765P7 747 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 UBALD2Q8IYN6 164 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 LMO3Q8TAP4 145 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 FAM200AQ8TCP9 573 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 TATDN2Q93075 761 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 TRMT2BQ96GJ1 504 aaKnown RBP11.33□□□□□ -0.6
RBBP4-209ENST00000465780 C8orf48Q96LL4 319 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 MYRFLQ96LU7 910 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 LPIN3Q9BQK8 851 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 B3GNT5Q9BYG0 378 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 CISHQ9NSE2 258 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 EHD2Q9NZN4 543 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 MUTYHQ9UIF7 546 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 SORCS3Q9UPU3 1222 aa11.33□□□□□ -0.6
RBBP4-209ENST00000465780 NUP210Q8TEM1 1887 aaPredicted RBP11.32□□□□□ -0.6
RBBP4-209ENST00000465780 ZDBF2Q9HCK1 2354 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 SLC38A8A6NNN8 435 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 LETM1O95202 739 aaPredicted RBP11.32□□□□□ -0.6
RBBP4-209ENST00000465780 CEBPBP17676 345 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 EEF1GP26641 437 aaKnown RBP11.32□□□□□ -0.6
RBBP4-209ENST00000465780 ANXA13P27216 316 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 WEE1P30291 646 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 GRIK1P39086 918 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 MTIF2P46199 727 aaKnown RBP11.32□□□□□ -0.6
RBBP4-209ENST00000465780 GPR15P49685 360 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 MTMR3Q13615 1198 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 HTR4Q13639 388 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 MAN2A1Q16706 1144 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 DDR2Q16832 855 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 GAREM2Q75VX8 874 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 ACOT1Q86TX2 421 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 FAM35AQ86V20 835 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 SCN4BQ8IWT1 228 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 EHBP1Q8NDI1 1231 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 SHKBP1Q8TBC3 707 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 WHAMMQ8TF30 809 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 GIPC2Q8TF65 315 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 EDAQ92838 391 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.6
RBBP4-209ENST00000465780 TCEAL4Q96EI5 215 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 SMARCD1Q96GM5 515 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 FAM81BQ96LP2 452 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 GCNAQ96QF7 691 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 ZNF518BQ9C0D4 1074 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 KCNK12Q9HB15 430 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 IL21Q9HBE4 155 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 ZNF334Q9HCZ1 680 aaPredicted RBP11.32□□□□□ -0.6
RBBP4-209ENST00000465780 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.32□□□□□ -0.61e-6■■■■■ 104.1
RBBP4-209ENST00000465780 HMGXB4Q9UGU5 601 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 NFE2L3Q9Y4A8 694 aa11.32□□□□□ -0.6
RBBP4-209ENST00000465780 F5P12259 2224 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 PATJQ8NI35 1801 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 A0A1W2PRU2 124 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 F8VP50 259 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 ECI2O75521 394 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 F11P03951 625 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 CD58P19256 250 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 DDX6P26196 483 aaKnown RBP eCLIP11.31□□□□□ -0.6
RBBP4-209ENST00000465780 GABRR2P28476 465 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 ZXDAP98168 799 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 GCNT1Q02742 428 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 TYRO3Q06418 890 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 TDGQ13569 410 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 SKOR2Q2VWA4 1001 aaPredicted RBP11.31□□□□□ -0.6
RBBP4-209ENST00000465780 ARHGAP15Q53QZ3 475 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 CAVIN1Q6NZI2 390 aaKnown RBP11.31□□□□□ -0.6
RBBP4-209ENST00000465780 DENND5BQ6ZUT9 1274 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 PAQR9Q6ZVX9 377 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 FUKQ8N0W3 1084 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 UBR7Q8N806 425 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 ING5Q8WYH8 240 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 JAKMIP2Q96AA8 810 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 MCRS1Q96EZ8 462 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 TMEM176AQ96HP8 235 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 TWNKQ96RR1 684 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 HNRNPABQ99729 332 aaKnown RBP11.31□□□□□ -0.6
RBBP4-209ENST00000465780 ARID3AQ99856 593 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 MED10Q9BTT4 135 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 TTLL2Q9BWV7 592 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 C1QTNF1Q9BXJ1 281 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 ATXN3LQ9H3M9 355 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 TRPV4Q9HBA0 871 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 CSNK1G1Q9HCP0 422 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 DMAP1Q9NPF5 467 aaPredicted RBP11.31□□□□□ -0.6
RBBP4-209ENST00000465780 COMMD8Q9NX08 183 aa11.31□□□□□ -0.6
RBBP4-209ENST00000465780 KCNJ18B7U540 433 aa11.3□□□□□ -0.6
RBBP4-209ENST00000465780 CLDN5O00501 218 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms