RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 ADORA2BP29275 332 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 CDC25CP30307 473 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 CCR2P41597 374 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 EPHA5P54756 1037 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 MTMR3Q13615 1198 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 TEAD2Q15562 447 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 EXOC3L4Q17RC7 722 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 ARHGAP15Q53QZ3 475 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 TMC8Q8IU68 726 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 NPAS3Q8IXF0 933 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 AOPEPQ8N6M6 819 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 LMO3Q8TAP4 145 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 SMARCD1Q96GM5 515 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 TMEM176AQ96HP8 235 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 HEXIM2Q96MH2 286 aaKnown RBP12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 ATXN3LQ9H3M9 355 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 NDST4Q9H3R1 872 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 ZNF334Q9HCZ1 680 aaPredicted RBP12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 KRT82Q9NSB4 513 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 TAB2Q9NYJ8 693 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 GDE1Q9NZC3 331 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 EHD2Q9NZN4 543 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 UXTQ9UBK9 157 aaPredicted RBP12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 PCDHB4Q9Y5E5 795 aa12.78□□□□□ -0.36
RPUSD3-211ENST00000464783 GTPBP10A4D1E9 387 aaKnown RBP12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 MICAL2O94851 1124 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 ASGR2P07307 311 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 FAM200BP0CF97 657 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 CDK11BP21127 795 aaKnown RBP12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 RAD23BP54727 409 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 GCNT1Q02742 428 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 IFRD2Q12894 506 aaPredicted RBP12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 CDKAL1Q5VV42 579 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 TRIM65Q6PJ69 517 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 TMEM270Q6UE05 265 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 MTSS1LQ765P7 747 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 ARHGEF19Q8IW93 802 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 FUKQ8N0W3 1084 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 SLC4A11Q8NBS3 891 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 ST13P5Q8NFI4 369 aaPredicted RBP12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 SHKBP1Q8TBC3 707 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 WHAMMQ8TF30 809 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 CYFIP2Q96F07 1278 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 SPATA17Q96L03 361 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 C8orf48Q96LL4 319 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 CEP295NLQ96MC4 621 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 LRRC3Q9BY71 257 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 VPS16Q9H269 839 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 UBE2TQ9NPD8 197 aaPredicted RBP12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 DMAP1Q9NPF5 467 aaPredicted RBP12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 BDP1A6H8Y1 2624 aa12.77□□□□□ -0.37
RPUSD3-211ENST00000464783 ANAPC1Q9H1A4 1944 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 SMTNL1A8MU46 457 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 BECN2A8MW95 431 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 DCXO43602 365 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 NOL4O94818 638 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 ALADP13716 330 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 CD19P15391 556 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 HMGA1P17096 107 aaKnown RBP12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 SLC9A1P19634 815 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 ZNF165P49910 485 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 CACNA2D1P54289 1103 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 MFAP3P55082 362 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 CYP4F8P98187 520 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 KRT31Q15323 416 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 PTPN21Q16825 1174 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 ZSCAN23Q3MJ62 389 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 MIIPQ5JXC2 388 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 PHLDB3Q6NSJ2 640 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 MRPS31Q92665 395 aaKnown RBP12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 KAT5Q92993 513 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 TRMT2BQ96GJ1 504 aaKnown RBP12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 FAM81BQ96LP2 452 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 KCNK16Q96T55 309 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 HNRNPABQ99729 332 aaKnown RBP12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 BPIFA3Q9BQP9 254 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 GPR88Q9GZN0 384 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 KCNK12Q9HB15 430 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 IGSF9Q9P2J2 1179 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 APEX2Q9UBZ4 518 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 SORCS3Q9UPU3 1222 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 NUMBLQ9Y6R0 609 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 TTC28Q96AY4 2481 aa12.76□□□□□ -0.37
RPUSD3-211ENST00000464783 MOSPD3O75425 235 aa12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 KRT5P13647 590 aa12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 PON1P27169 355 aa12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 HELZP42694 1942 aaKnown RBP12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 MAP3K7CLP57077 242 aa12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 SLC8A3P57103 927 aa12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 HTR4Q13639 388 aa12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 SGO2Q562F6 1265 aa12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 FKBP15Q5T1M5 1219 aa12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 GPR158Q5T848 1215 aa12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 PPP1R26Q5T8A7 1209 aaPredicted RBP12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 PAQR9Q6ZVX9 377 aa12.75□□□□□ -0.37
RPUSD3-211ENST00000464783 GAREM2Q75VX8 874 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms