RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	TUBB3	Q13509	450 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	SF3B3	Q15393	1217 aa	Known RBP	4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	PLA1A	Q53H76	456 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	RRAGB	Q5VZM2	374 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	SYCE2	Q6PIF2	218 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	OLFML1	Q6UWY5	402 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	TSHZ1	Q6ZSZ6	1077 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	MICALCL	Q6ZW33	695 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	KCTD20	Q7Z5Y7	419 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	MORC1	Q86VD1	984 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	COLGALT2	Q8IYK4	626 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	OR2C3	Q8N628	320 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	BEND2	Q8NDZ0	799 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	LPIN2	Q92539	896 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	GJA10	Q969M2	543 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	KIAA1191	Q96A73	305 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	PTCD3	Q96EY7	689 aa	Known RBP	4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	CCDC138	Q96M89	665 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	MESP1	Q9BRJ9	268 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	BRIP1	Q9BX63	1249 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	ZNF700	Q9H0M5	742 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	CHST8	Q9H2A9	424 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	INTS13	Q9NVM9	706 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	TES	Q9UGI8	421 aa	Known RBP	4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	HDAC9	Q9UKV0	1011 aa		4.96	□□□□□ -1.62
PTPN12-210	ENST00000464313	KIAA0355	O15063	1070 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	PDHA1	P08559	390 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	TXN	P10599	105 aa	Known RBP	4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	CD6	P30203	668 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	ITGA8	P53708	1063 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	SP2	Q02086	613 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	HLX	Q14774	488 aa	Predicted RBP	4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	FAM209B	Q5JX69	171 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	ARHGAP40	Q5TG30	622 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	SP5	Q6BEB4	398 aa	Predicted RBP	4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	ARMC6	Q6NXE6	501 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	GAS2L3	Q86XJ1	694 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	FAM186B	Q8IYM0	893 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	SGCZ	Q96LD1	299 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	MOGAT1	Q96PD6	335 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	SERHL2	Q9H4I8	314 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	CXorf36	Q9H7Y0	433 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	NLRC4	Q9NPP4	1024 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	SERTAD3	Q9UJW9	196 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	NDRG4	Q9ULP0	352 aa	Known RBP	4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	SHOC2	Q9UQ13	582 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	PAXBP1	Q9Y5B6	917 aa		4.95	□□□□□ -1.62
PTPN12-210	ENST00000464313	RAB27B	O00194	218 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	FOXN3	O00409	490 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	APOL1	O14791	398 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	SOAT2	O75908	522 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	ANXA2	P07355	339 aa	Known RBP	4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	RHO	P08100	348 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	EGR2	P11161	476 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	CYP2C9	P11712	490 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	HARS	P12081	509 aa	Known RBP	4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	ZEB1	P37275	1124 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	MYO1E	Q12965	1108 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	STRIP1	Q5VSL9	837 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	CACHD1	Q5VU97	1274 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	FAM109A	Q8N4B1	249 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	MYCBPAP	Q8TBZ2	947 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	PMM1	Q92871	262 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	FUBP1	Q96AE4	644 aa	Known RBP	4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	IQCD	Q96DY2	449 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313		Q96MF0	132 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	TPSD1	Q9BZJ3	242 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	CASS4	Q9NQ75	786 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	SERHL	Q9NQF3	203 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	STARD7	Q9NQZ5	370 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	TBCCD1	Q9NVR7	557 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	ZNF212	Q9UDV6	495 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	DMTF1	Q9Y222	760 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	DAAM1	Q9Y4D1	1078 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	PCDHGB2	Q9Y5G2	931 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313	SPATA31A3	Q5VYP0	1347 aa		4.94	□□□□□ -1.62
PTPN12-210	ENST00000464313		A0A1W2PPC4	97 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	PIPSL	A2A3N6	862 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	PPM1D	O15297	605 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	TRIAP1	O43715	76 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	CSF1R	P07333	972 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	XRCC6	P12956	609 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	ABCB4	P21439	1286 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	FGFR2	P21802	821 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	ACVR2A	P27037	513 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	IL1R2	P27930	398 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	ADORA2A	P29274	412 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	CLK3	P49761	638 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	EIF2B5	Q13144	721 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	PTCHD3	Q3KNS1	767 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	MGAT5B	Q3V5L5	792 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	SLC44A3	Q8N4M1	653 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	SAMD3	Q8N6K7	520 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	ATP11C	Q8NB49	1132 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	B3GALNT2	Q8NCR0	500 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	VPS37A	Q8NEZ2	397 aa		4.93	□□□□□ -1.62
PTPN12-210	ENST00000464313	TOR1AIP2	Q8NFQ8	470 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms