RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 RHOBTB3O94955 611 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 NR3C1P04150 777 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 BDNFP23560 247 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 CTHP32929 405 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 MCCD1P59942 119 aaPredicted RBP13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 CSTF1Q05048 431 aaKnown RBP13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 TAF12Q16514 161 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 ARHGAP29Q52LW3 1261 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 TSSK4Q6SA08 328 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 KRBA2Q6ZNG9 492 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 YAF2Q8IY57 180 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 ADSSL1Q8N142 457 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 FSIP1Q8NA03 581 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 SPATA17Q96L03 361 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 SCAND2PQ9GZW5 306 aaPredicted RBP13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 SDCBP2Q9H190 292 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 HPS4Q9NQG7 708 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 GKN1Q9NS71 199 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 TDP1Q9NUW8 608 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 MAGEC2Q9UBF1 373 aaPredicted RBP13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 TRAF3IP3Q9Y228 551 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 GREB1Q4ZG55 1949 aa13.98□□□□□ -0.17
CTDSP1-206ENST00000464255 OBSL1O75147 1896 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 KIF26AQ9ULI4 1882 aaPredicted RBP13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 DPYSL4O14531 572 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 NCAM2O15394 837 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 LAMTOR5O43504 91 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 ZNF202O95125 648 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 PTPN1P18031 435 aaKnown RBP13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 DDX6P26196 483 aaKnown RBP eCLIP13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 ATICP31939 592 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 CDH8P55286 799 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 ZXDBP98169 803 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 ZNF268Q14587 947 aaPredicted RBP13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 MDH1BQ5I0G3 518 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 VSTM1Q6UX27 236 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 C4orf50Q6ZRC1 276 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 PAQR9Q6ZVX9 377 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 SCN4BQ8IWT1 228 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 SUMF1Q8NBK3 374 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 ZBTB44Q8NCP5 570 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 CSGALNACT1Q8TDX6 532 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 GCNAQ96QF7 691 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 B3GNT5Q9BYG0 378 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 SEMA4AQ9H3S1 761 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 SMYD3Q9H7B4 428 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 C8orf33Q9H7E9 229 aaPredicted RBP13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 RBM12Q9NTZ6 932 aaKnown RBP13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 C2orf42Q9NWW7 574 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 NXF1Q9UBU9 619 aaKnown RBP13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 ZMYM5Q9UJ78 669 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 R3HCC1Q9Y3T6 440 aaKnown RBP13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 PTPRDP23468 1912 aa13.97□□□□□ -0.17
CTDSP1-206ENST00000464255 C2orf78A6NCI8 922 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 AKAP3O75969 853 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 LMNAP02545 664 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 HOXC13P31276 330 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 AVPR1AP37288 418 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 KPNA1P52294 538 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 AP3M2P53677 418 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 PLCB2Q00722 1185 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 CYP27A1Q02318 531 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 TRPC3Q13507 836 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 NCOA4Q13772 614 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 MAPRE1Q15691 268 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 NFIL3Q16649 462 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 ZACNQ401N2 412 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 TRIM68Q6AZZ1 485 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 RALGPS2Q86X27 583 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 OR6B3Q8NGW1 331 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 TMC2Q8TDI7 906 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 MRPS31Q92665 395 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 SYAP1Q96A49 352 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 C8orf48Q96LL4 319 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 CEP295NLQ96MC4 621 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 TTLL2Q9BWV7 592 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 ZNF518BQ9C0D4 1074 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 SNX25Q9H3E2 840 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 UXTQ9UBK9 157 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 MAPK8IP1Q9UQF2 711 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 ATP6V1DQ9Y5K8 247 aa13.96□□□□□ -0.17
CTDSP1-206ENST00000464255 CACNA1AO00555 2505 aa13.96□□□□□ -0.18
CTDSP1-206ENST00000464255 ANAPC1Q9H1A4 1944 aa13.96□□□□□ -0.18
CTDSP1-206ENST00000464255 F8VP50 259 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 CLDN5O00501 218 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 LILRB5O75023 590 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 ARSAP15289 507 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 GRIK1P39086 918 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 RAP1GAPP47736 663 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 TNNC1P63316 161 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 CCINQ13939 588 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 KCNB1Q14721 858 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 ZNF77Q15935 545 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 ITPRIPL2Q3MIP1 535 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 ZCWPW2Q504Y3 356 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 Q6ZS52 159 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 SV2AQ7L0J3 742 aa13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 FMR1NBQ8N0W7 255 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 ARL14EPQ8N8R7 260 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-206ENST00000464255 B3GALNT2Q8NCR0 500 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms