RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 MCRS1Q96EZ8 462 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 MS4A14Q96JA4 679 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 RPGRIP1Q96KN7 1286 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 RTP3Q9BQQ7 232 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 ACBD6Q9BR61 282 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 MYBPHLA2RUH7 354 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 PIK3R2O00459 728 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 CAPN15O75808 1086 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 UPP2O95045 317 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 MAN1A1P33908 653 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 CTNNA1P35221 906 aaKnown RBP20.04■□□□□ 0.8
CCDC78-206ENST00000463539 PLCB3Q01970 1234 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 FAM102AQ5T9C2 384 aaPredicted RBP20.04■□□□□ 0.8
CCDC78-206ENST00000463539 TMEM110Q86TL2 294 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 TMEM199Q8N511 208 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 MYCBPAPQ8TBZ2 947 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 UBXN4Q92575 508 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 DUSP16Q9BY84 665 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 CARD9Q9H257 536 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 METTL5Q9NRN9 209 aaKnown RBP20.04■□□□□ 0.8
CCDC78-206ENST00000463539 ABHD14A-ACY1A0A1B0GW23 586 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 CCDC66A2RUB6 948 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 CLDN5O00501 218 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 NRP1O14786 923 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 CEP104O60308 925 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 NPR3P17342 541 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 CTNNA2P26232 953 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 PLA2G4AP47712 749 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 YWHAHQ04917 246 aaPredicted RBP20.04■□□□□ 0.8
CCDC78-206ENST00000463539 OR6B2Q6IFH4 312 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 MFSD5Q6N075 450 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 FAM183BPQ6ZVS7 135 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 ALG3Q92685 438 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 KRT35Q92764 455 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 PCED1BQ96HM7 432 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 COLEC11Q9BWP8 271 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 KRT82Q9NSB4 513 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 EHD2Q9NZN4 543 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 ADAM28Q9UKQ2 775 aa20.04■□□□□ 0.8
CCDC78-206ENST00000463539 TTC3P53804 2025 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 XPO1O14980 1071 aaKnown RBP20.03■□□□□ 0.8
CCDC78-206ENST00000463539 ALDH2P05091 517 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 FAM200BP0CF97 657 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 RFC1P35251 1148 aaPredicted RBP20.03■□□□□ 0.8
CCDC78-206ENST00000463539 MARCKSL1P49006 195 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 SLC11A1P49279 550 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 INTS6LQ5JSJ4 861 aaKnown RBP20.03■□□□□ 0.8
CCDC78-206ENST00000463539 TEX35Q5T0J7 233 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 PAQR9Q6ZVX9 377 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 ZNF572Q7Z3I7 529 aaPredicted RBP20.03■□□□□ 0.8
CCDC78-206ENST00000463539 TMEM175Q9BSA9 504 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 B3GNT5Q9BYG0 378 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 CYLDQ9NQC7 956 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 SMARCAL1Q9NZC9 954 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 HCSTQ9UBK5 93 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 FAN1Q9Y2M0 1017 aa20.03■□□□□ 0.8
CCDC78-206ENST00000463539 EN2P19622 333 aaPredicted RBP20.02■□□□□ 0.8
CCDC78-206ENST00000463539 TSPY1Q01534 308 aa20.02■□□□□ 0.8
CCDC78-206ENST00000463539 ZNF252P-AS1Q0IIN9 211 aa20.02■□□□□ 0.8
CCDC78-206ENST00000463539 FAM35AQ86V20 835 aa20.02■□□□□ 0.8
CCDC78-206ENST00000463539 ZDHHC17Q8IUH5 632 aa20.02■□□□□ 0.8
CCDC78-206ENST00000463539 OR10T2Q8NGX3 314 aa20.02■□□□□ 0.8
CCDC78-206ENST00000463539 JOSD2Q8TAC2 188 aa20.02■□□□□ 0.8
CCDC78-206ENST00000463539 TSC1Q92574 1164 aa20.02■□□□□ 0.8
CCDC78-206ENST00000463539 HSFY1Q96LI6 401 aa20.02■□□□□ 0.8
CCDC78-206ENST00000463539 USTQ9Y2C2 406 aa20.02■□□□□ 0.8
CCDC78-206ENST00000463539 PCDHA3Q9Y5H8 950 aa20.02■□□□□ 0.8
CCDC78-206ENST00000463539 EFCAB14O75071 495 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 AMHP03971 560 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 ACADSBP45954 432 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 PEX5P50542 639 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 OGDHQ02218 1023 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 PIGHQ14442 188 aaPredicted RBP20.02■□□□□ 0.79
CCDC78-206ENST00000463539 NAA30Q147X3 362 aaPredicted RBP20.02■□□□□ 0.79
CCDC78-206ENST00000463539 ERCC6LQ2NKX8 1250 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 DCAF12L1Q5VU92 463 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 OLFML1Q6UWY5 402 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 RSRC2Q7L4I2 434 aaKnown RBP20.02■□□□□ 0.79
CCDC78-206ENST00000463539 UBE2Q1Q7Z7E8 422 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 ACTRT1Q8TDG2 376 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 FNIP1Q8TF40 1166 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 MYLPFQ96A32 169 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 MARCH5Q9NX47 278 aa20.02■□□□□ 0.79
CCDC78-206ENST00000463539 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.02■□□□□ 0.79
CCDC78-206ENST00000463539 PGRMC1O00264 195 aaKnown RBP20.01■□□□□ 0.79
CCDC78-206ENST00000463539 SYN3O14994 580 aa20.01■□□□□ 0.79
CCDC78-206ENST00000463539 PAPSS1O43252 624 aaPredicted RBP20.01■□□□□ 0.79
CCDC78-206ENST00000463539 DGKIO75912 1065 aa20.01■□□□□ 0.79
CCDC78-206ENST00000463539 RPL34P49207 117 aaKnown RBP20.01■□□□□ 0.79
CCDC78-206ENST00000463539 CDR1P51861 262 aa20.01■□□□□ 0.79
CCDC78-206ENST00000463539 BCAR1P56945 870 aa20.01■□□□□ 0.79
CCDC78-206ENST00000463539 RNASE9P60153 205 aaKnown RBP20.01■□□□□ 0.79
CCDC78-206ENST00000463539 TUBB4BP68371 445 aa20.01■□□□□ 0.79
CCDC78-206ENST00000463539 MAPRE1Q15691 268 aaKnown RBP20.01■□□□□ 0.79
CCDC78-206ENST00000463539 FAM171BQ6P995 826 aa20.01■□□□□ 0.79
CCDC78-206ENST00000463539 CLEC20AQ6ZU45 233 aa20.01■□□□□ 0.79
CCDC78-206ENST00000463539 PIGZQ86VD9 579 aa20.01■□□□□ 0.79
CCDC78-206ENST00000463539 SCUBE3Q8IX30 993 aa20.01■□□□□ 0.79
CCDC78-206ENST00000463539 EMC1Q8N766 993 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms