RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 PAEPP09466 180 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 CIITAP33076 1130 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 MLH1P40692 756 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 PDK3Q15120 406 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 COBLL1Q53SF7 1204 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 FOXR2Q6PJQ5 311 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 CCDC103Q8IW40 242 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 ZNF513Q8N8E2 541 aaPredicted RBP16.41■□□□□ 0.22
SMC4-204ENST00000462787 MAB21L3Q8N8X9 362 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 EZH1Q92800 747 aaPredicted RBP16.41■□□□□ 0.22
SMC4-204ENST00000462787 MRPS26Q9BYN8 205 aaKnown RBP16.41■□□□□ 0.22
SMC4-204ENST00000462787 COL15A1P39059 1388 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 C3orf70A6NLC5 250 aaPredicted RBP16.41■□□□□ 0.22
SMC4-204ENST00000462787 FESP07332 822 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 FCGR1AP12314 374 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 FECHP22830 423 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 RPA3P35244 121 aaPredicted RBP16.41■□□□□ 0.22
SMC4-204ENST00000462787 BOLA3Q53S33 107 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 CLVS1Q8IUQ0 354 aaPredicted RBP16.41■□□□□ 0.22
SMC4-204ENST00000462787 TMEM121Q9BTD3 319 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 GRIP2Q9C0E4 1043 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 BRD8Q9H0E9 1235 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 HACD3Q9P035 362 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 SERPINE1P05121 402 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 ACOT2P49753 483 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 ATP1A4Q13733 1029 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 LAYNQ6UX15 382 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 NSUN6Q8TEA1 469 aaKnown RBP16.41■□□□□ 0.22
SMC4-204ENST00000462787 PLGRKTQ9HBL7 147 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 BLOC1S4Q9NUP1 217 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 TMEM94Q12767 1356 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 GRIN2DO15399 1336 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 SERPINI2O75830 405 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 GPD1P21695 349 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 NR1H2P55055 460 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 INAQ16352 499 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 AAGABQ6PD74 315 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 TRAF7Q6Q0C0 670 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 CCDC80Q76M96 950 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 DHDDSQ86SQ9 333 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 FAM13CQ8NE31 585 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 DLG3Q92796 817 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 COPG2Q9UBF2 871 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 DAPK2Q9UIK4 370 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 DPPA5A6NC42 116 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 TTKP33981 857 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 CUL2Q13617 745 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 MFSD5Q6N075 450 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 LRRC55Q6ZSA7 311 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 SRPK1Q96SB4 655 aaKnown RBP16.4■□□□□ 0.22
SMC4-204ENST00000462787 PI4K2AQ9BTU6 479 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 LCA5LO95447 670 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 PTPRN2Q92932 1015 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 CNKSR1Q969H4 720 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 TBC1D12O60347 775 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 SLC4A1P02730 911 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 KCNA2P16389 499 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 ETNPPLQ8TBG4 499 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 RNF139Q8WU17 664 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 VPS50Q96JG6 964 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 COG4Q9H9E3 785 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.4■□□□□ 0.222e-7■■■■□ 26.2
SMC4-204ENST00000462787 KIF20BQ96Q89 1820 aa16.4■□□□□ 0.22
SMC4-204ENST00000462787 MSH4O15457 936 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 PHKA2P46019 1235 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 PDK1Q15118 436 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 TRIM60Q495X7 471 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 KCNV1Q6PIU1 500 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 DGCR14Q96DF8 476 aaKnown RBP16.39■□□□□ 0.21
SMC4-204ENST00000462787 GCNAQ96QF7 691 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 NIF3L1Q9GZT8 377 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 PPME1Q9Y570 386 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 E9PBE3 544 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 KLHL41O60662 606 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 CPA3P15088 417 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 SP100P23497 879 aaPredicted RBP16.39■□□□□ 0.21
SMC4-204ENST00000462787 WDR72Q3MJ13 1102 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 TCHHL1Q5QJ38 904 aaPredicted RBP16.39■□□□□ 0.21
SMC4-204ENST00000462787 C4orf50Q6ZRC1 276 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 ZNF720Q7Z2F6 126 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 SLC47A2Q86VL8 602 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 OR6P1Q8NGX9 317 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 ARHGEF1Q92888 912 aaKnown RBP16.39■□□□□ 0.21
SMC4-204ENST00000462787 WNK4Q96J92 1243 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 MAGED4Q96JG8 741 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 GANQ9H2C0 597 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 HSD3B7Q9H2F3 369 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 CLIC5Q9NZA1 410 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 FAM8A1Q9UBU6 413 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 NARFQ9UHQ1 456 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 CD163L1Q9NR16 1453 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 C5orf60A6NFR6 353 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 CBFA2T3O75081 653 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 CA8P35219 290 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 RPS6KA3P51812 740 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 KCNK10P57789 538 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 RASGEF1CQ8N431 466 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 TMC2Q8TDI7 906 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 PYDC1Q8WXC3 89 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 LRRC19Q9H756 370 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms