RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 LIN9Q5TKA1 542 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 NAA35Q5VZE5 725 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 PPP2R2DQ66LE6 453 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 TMEM110Q86TL2 294 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 LRRTM3Q86VH5 581 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 ERICH1Q86X53 443 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 ZDHHC17Q8IUH5 632 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 POF1BQ8WVV4 589 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 KCTD13Q8WZ19 329 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 MYLPFQ96A32 169 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 TIFAQ96CG3 184 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 ZNF830Q96NB3 372 aaPredicted RBP11.29□□□□□ -0.6
RTF1-202ENST00000462276 PCDHB18PQ96TA0 734 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 CLSTN3Q9BQT9 956 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 C17orf80Q9BSJ5 609 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 DMAP1Q9NPF5 467 aaPredicted RBP11.29□□□□□ -0.6
RTF1-202ENST00000462276 FAM49BQ9NUQ9 324 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 EHD2Q9NZN4 543 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 ZKSCAN5Q9Y2L8 839 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 YBX2Q9Y2T7 364 aaKnown RBP11.29□□□□□ -0.6
RTF1-202ENST00000462276 PCDHA13Q9Y5I0 950 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 CDY1Q9Y6F8 540 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
RTF1-202ENST00000462276 SCN1AP35498 2009 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 TRIP11Q15643 1979 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 BTNL10A8MVZ5 291 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 FSCN2O14926 492 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 SART1O43290 800 aaKnown RBP11.28□□□□□ -0.6
RTF1-202ENST00000462276 AP1G2O75843 785 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 TMEM253P0C7T8 217 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 CCDC130P13994 396 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 ATF2P15336 505 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 DNAJB2P25686 324 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 OR1D2P34982 312 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 SCNN1AP37088 669 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 GABRB2P47870 512 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 VAV2P52735 878 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 GPC5P78333 572 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 GPM6BQ13491 265 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 ZNF268Q14587 947 aaPredicted RBP11.28□□□□□ -0.6
RTF1-202ENST00000462276 TCEAL1Q15170 157 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 PTPROQ16827 1216 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 SLC39A12Q504Y0 691 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 DENND1BQ6P3S1 775 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 ELMSAN1Q6PJG2 1045 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 PRSS55Q6UWB4 352 aaPredicted RBP11.28□□□□□ -0.6
RTF1-202ENST00000462276 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 PAQR9Q6ZVX9 377 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 KIAA1328Q86T90 577 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 FAM35AQ86V20 835 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 TTC30AQ86WT1 665 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 WDTC1Q8N5D0 677 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 C1orf131Q8NDD1 294 aaKnown RBP11.28□□□□□ -0.6
RTF1-202ENST00000462276 OLIG1Q8TAK6 271 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 KIAA1524Q8TCG1 905 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 IPO4Q8TEX9 1081 aaKnown RBP11.28□□□□□ -0.6
RTF1-202ENST00000462276 CTNNBL1Q8WYA6 563 aaPredicted RBP11.28□□□□□ -0.6
RTF1-202ENST00000462276 SECISBP2LQ93073 1101 aaKnown RBP11.28□□□□□ -0.6
RTF1-202ENST00000462276 PPP2R3CQ969Q6 453 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 C18orf8Q96DM3 657 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 PPP1R13BQ96KQ4 1090 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 C8orf48Q96LL4 319 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 TCF25Q9BQ70 676 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
RTF1-202ENST00000462276 ENTPD7Q9NQZ7 604 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 SPTLC3Q9NUV7 552 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 COMMD8Q9NX08 183 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 ADAM22Q9P0K1 906 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 LCMT1Q9UIC8 334 aa11.28□□□□□ -0.6
RTF1-202ENST00000462276 PDCD11Q14690 1871 aaKnown RBP11.27□□□□□ -0.6
RTF1-202ENST00000462276 FNDC1Q4ZHG4 1894 aaPredicted RBP11.27□□□□□ -0.6
RTF1-202ENST00000462276 A0A0A6YYK5 440 aaPredicted RBP11.27□□□□□ -0.61
RTF1-202ENST00000462276 C2orf71A6NGG8 1288 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 C2CD2LO14523 706 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 ZNF263O14978 683 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 TEX28O15482 410 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 PJA2O43164 708 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 HCRTO43612 131 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 KRT86O43790 486 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 FBXO21O94952 628 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 ADORA2BP29275 332 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 ELF1P32519 619 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 PBX2P40425 430 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 GSCP56915 257 aaPredicted RBP11.27□□□□□ -0.61
RTF1-202ENST00000462276 ROR1Q01973 937 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 PDE4CQ08493 712 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 PDCLQ13371 301 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 MTF1Q14872 753 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 IFI16Q16666 785 aaKnown RBP11.27□□□□□ -0.61
RTF1-202ENST00000462276 RSPO2Q6UXX9 243 aaPredicted RBP11.27□□□□□ -0.61
RTF1-202ENST00000462276 TOGARAM2Q6ZUX3 1019 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 ZSCAN30Q86W11 494 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 GPIHBP1Q8IV16 184 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 RHOT2Q8IXI1 618 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 MCOLN2Q8IZK6 566 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 SCML4Q8N228 414 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 RNF10Q8N5U6 811 aaKnown RBP11.27□□□□□ -0.61
RTF1-202ENST00000462276 UBA3Q8TBC4 463 aa11.27□□□□□ -0.61
RTF1-202ENST00000462276 MICAL1Q8TDZ2 1067 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms