RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 ABCB6Q9NP58 842 aa19.68■□□□□ 0.74
COL9A2-205ENST00000461118 TMLHEQ9NVH6 421 aa19.68■□□□□ 0.74
COL9A2-205ENST00000461118 USP18Q9UMW8 372 aa19.68■□□□□ 0.74
COL9A2-205ENST00000461118 ZFHX4Q86UP3 3567 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 PHACTR2O75167 634 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 PSMC2P35998 433 aaKnown RBP19.67■□□□□ 0.74
COL9A2-205ENST00000461118 SATB1Q01826 763 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 DMWDQ09019 674 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 MGAT5BQ3V5L5 792 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 ZACNQ401N2 412 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 C1orf220Q5T0J3 134 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 FAM171BQ6P995 826 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 INTS8Q75QN2 995 aaKnown RBP19.67■□□□□ 0.74
COL9A2-205ENST00000461118 ITIH5Q86UX2 942 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 TMC8Q8IU68 726 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 ZSCAN18Q8TBC5 510 aaPredicted RBP19.67■□□□□ 0.74
COL9A2-205ENST00000461118 ERCC4Q92889 916 aaPredicted RBP19.67■□□□□ 0.74
COL9A2-205ENST00000461118 MMS19Q96T76 1030 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 GTF3C4Q9UKN8 822 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.67■□□□□ 0.74
COL9A2-205ENST00000461118 SPAG17Q6Q759 2223 aa19.67■□□□□ 0.74
COL9A2-205ENST00000461118 USP24Q9UPU5 2620 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 SOAT2O75908 522 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 VNN1O95497 513 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 MYL4P12829 197 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 ATF6P18850 670 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 ACAT1P24752 427 aaKnown RBP19.66■□□□□ 0.74
COL9A2-205ENST00000461118 LMO2P25791 158 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 CCR3P51677 355 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 VAMP7P51809 220 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 NRLP54845 237 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 MLLT6P55198 1093 aaPredicted RBP19.66■□□□□ 0.74
COL9A2-205ENST00000461118 BIRC3Q13489 604 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 NCOA4Q13772 614 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 TEAD2Q15562 447 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 LAIR1Q6GTX8 287 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 SV2AQ7L0J3 742 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 MFSD6LQ8IWD5 586 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 CELF5Q8N6W0 485 aaKnown RBP19.66■□□□□ 0.74
COL9A2-205ENST00000461118 SHKBP1Q8TBC3 707 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 DEPDC1BQ8WUY9 529 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 SEPT5Q99719 369 aaPredicted RBP19.66■□□□□ 0.74
COL9A2-205ENST00000461118 MKNK1Q9BUB5 465 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 GPR88Q9GZN0 384 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 ABI2Q9NYB9 513 aaPredicted RBP19.66■□□□□ 0.74
COL9A2-205ENST00000461118 GMEB2Q9UKD1 530 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 CDH9Q9ULB4 789 aa19.66■□□□□ 0.74
COL9A2-205ENST00000461118 OBSL1O75147 1896 aa19.65■□□□□ 0.74
COL9A2-205ENST00000461118 K7ESF4 209 aa19.65■□□□□ 0.74
COL9A2-205ENST00000461118 HRO43593 1189 aa19.65■□□□□ 0.74
COL9A2-205ENST00000461118 FGF19O95750 216 aa19.65■□□□□ 0.74
COL9A2-205ENST00000461118 ADRB1P08588 477 aa19.65■□□□□ 0.74
COL9A2-205ENST00000461118 CCNE1P24864 410 aa19.65■□□□□ 0.74
COL9A2-205ENST00000461118 UBE2HP62256 183 aa19.65■□□□□ 0.74
COL9A2-205ENST00000461118 TNNC1P63316 161 aa19.65■□□□□ 0.74
COL9A2-205ENST00000461118 VEPH1Q14D04 833 aa19.65■□□□□ 0.74
COL9A2-205ENST00000461118 MAPRE1Q15691 268 aaKnown RBP19.65■□□□□ 0.74
COL9A2-205ENST00000461118 CFAP221Q4G0U5 840 aa19.65■□□□□ 0.74
COL9A2-205ENST00000461118 FAM186BQ8IYM0 893 aa19.65■□□□□ 0.74
COL9A2-205ENST00000461118 FUBP3Q96I24 572 aaKnown RBP eCLIP19.65■□□□□ 0.74
COL9A2-205ENST00000461118 MYBPHLA2RUH7 354 aa19.64■□□□□ 0.73
COL9A2-205ENST00000461118 HEPACAM2A8MVW5 462 aa19.64■□□□□ 0.73
COL9A2-205ENST00000461118 HCRTO43612 131 aa19.64■□□□□ 0.73
COL9A2-205ENST00000461118 HOXC13P31276 330 aa19.64■□□□□ 0.73
COL9A2-205ENST00000461118 GNL1P36915 607 aaPredicted RBP19.64■□□□□ 0.73
COL9A2-205ENST00000461118 CXCL12P48061 93 aa19.64■□□□□ 0.73
COL9A2-205ENST00000461118 SGSM1Q2NKQ1 1148 aa19.64■□□□□ 0.73
COL9A2-205ENST00000461118 ZC3H3Q8IXZ2 948 aaKnown RBP19.64■□□□□ 0.73
COL9A2-205ENST00000461118 TAF4BQ92750 862 aa19.64■□□□□ 0.73
COL9A2-205ENST00000461118 LRRC3BQ96PB8 259 aa19.64■□□□□ 0.73
COL9A2-205ENST00000461118 SYT15Q9BQS2 421 aa19.64■□□□□ 0.73
COL9A2-205ENST00000461118 MRPL45Q9BRJ2 306 aaKnown RBP19.64■□□□□ 0.73
COL9A2-205ENST00000461118 PI4K2AQ9BTU6 479 aa19.64■□□□□ 0.73
COL9A2-205ENST00000461118 C2orf42Q9NWW7 574 aa19.64■□□□□ 0.73
COL9A2-205ENST00000461118 SLC30A4O14863 429 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 ZNF263O14978 683 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 CETN3O15182 167 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 LRP3O75074 770 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 ATP2C2O75185 946 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 PAPSS2O95340 614 aaPredicted RBP19.63■□□□□ 0.73
COL9A2-205ENST00000461118 RETP07949 1114 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 PDGFRBP09619 1106 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 KRT13P13646 458 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 PPP1R2P41236 205 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 CDR1P51861 262 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 RPL10AP62906 217 aaKnown RBP19.63■□□□□ 0.73
COL9A2-205ENST00000461118 FCHO2Q0JRZ9 810 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 SRSF5Q13243 272 aaKnown RBP19.63■□□□□ 0.73
COL9A2-205ENST00000461118 ZNF699Q32M78 642 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 ZNF667Q5HYK9 610 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 TXNDC11Q6PKC3 985 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 C4orf50Q6ZRC1 276 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 GAREM2Q75VX8 874 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 SPEM1Q8N4L4 309 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 LPIN3Q9BQK8 851 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 SNX25Q9H3E2 840 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 CRTAC1Q9NQ79 661 aa19.63■□□□□ 0.73
COL9A2-205ENST00000461118 RBM12Q9NTZ6 932 aaKnown RBP19.63■□□□□ 0.73
COL9A2-205ENST00000461118 NXF1Q9UBU9 619 aaKnown RBP19.63■□□□□ 0.73
COL9A2-205ENST00000461118 MAN1B1Q9UKM7 699 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms