RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 CCDC186Q7Z3E2 898 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 ADHFE1Q8IWW8 467 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 TATDN2Q93075 761 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 JAKMIP2Q96AA8 810 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 PCED1BQ96HM7 432 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 ELOVL4Q9GZR5 314 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 DPEP3Q9H4B8 488 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 POMKQ9H5K3 350 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 USTQ9Y2C2 406 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 SLC27A5Q9Y2P5 690 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 NR2E1Q9Y466 385 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 NCOR1O75376 2440 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 CASQ1P31415 396 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 ZNF75DP51815 510 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 CYP27A1Q02318 531 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 LRMPQ12912 555 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
APTX-209ENST00000460940 PABPC1LQ4VXU2 614 aaKnown RBP11.77□□□□□ -0.53
APTX-209ENST00000460940 TRIM65Q6PJ69 517 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 DHX40Q8IX18 779 aaKnown RBP11.77□□□□□ -0.53
APTX-209ENST00000460940 PPM1KQ8N3J5 372 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 TTC9BQ8N6N2 239 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 ADAMTS19Q8TE59 1207 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 PSMG2Q969U7 264 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 ZNF512Q96ME7 567 aaPredicted RBP11.77□□□□□ -0.53
APTX-209ENST00000460940 ASAH2Q9NR71 780 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 ZNF446Q9NWS9 450 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 CWC15Q9P013 229 aaKnown RBP11.77□□□□□ -0.53
APTX-209ENST00000460940 HMGXB4Q9UGU5 601 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 LIMA1Q9UHB6 759 aaKnown RBP11.77□□□□□ -0.53
APTX-209ENST00000460940 RSPH14Q9UHP6 348 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 DENND4AQ7Z401 1863 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 UNC80Q8N2C7 3258 aa11.77□□□□□ -0.53
APTX-209ENST00000460940 BECN2A8MW95 431 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 TRIM66O15016 1216 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 ATP8B1O43520 1251 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 FGF19O95750 216 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 PTPN2P17706 415 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 EPHA5P54756 1037 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 ZP2Q05996 745 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 CCDC142Q17RM4 750 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 ICE2Q659A1 982 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 OTOP3Q7RTS5 596 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 GRASPQ7Z6J2 395 aaPredicted RBP11.76□□□□□ -0.53
APTX-209ENST00000460940 ACOT1Q86TX2 421 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 UBR7Q8N806 425 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 PLCD4Q9BRC7 762 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 TAB2Q9NYJ8 693 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 CEP72Q9P209 647 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 CDH22Q9UJ99 828 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 V9GYY5 206 aaPredicted RBP11.76□□□□□ -0.53
APTX-209ENST00000460940 C2orf16Q68DN1 1984 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 BDP1A6H8Y1 2624 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 PES1O00541 588 aaKnown RBP11.76□□□□□ -0.53
APTX-209ENST00000460940 ZNF197O14709 1029 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 MICAL2O94851 1124 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 RHOP08100 348 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 ATF6P18850 670 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 RFX1P22670 979 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 FSHRP23945 695 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 CYP2F1P24903 491 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 ELF2Q15723 593 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 FKBP15Q5T1M5 1219 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 FAM35AQ86V20 835 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 TDRD5Q8NAT2 981 aaKnown RBP11.76□□□□□ -0.53
APTX-209ENST00000460940 WHAMMQ8TF30 809 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 SMARCD1Q96GM5 515 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 SPATA17Q96L03 361 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 C8orf48Q96LL4 319 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 TWNKQ96RR1 684 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 CRACR2AQ9BSW2 395 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 B3GNT5Q9BYG0 378 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 HSD3B7Q9H2F3 369 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.76□□□□□ -0.53
APTX-209ENST00000460940 DNMT3BQ9UBC3 853 aaKnown RBP11.76□□□□□ -0.53
APTX-209ENST00000460940 APEX2Q9UBZ4 518 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 FHOD1Q9Y613 1164 aa11.76□□□□□ -0.53
APTX-209ENST00000460940 ZFP37Q9Y6Q3 630 aaPredicted RBP11.76□□□□□ -0.53
APTX-209ENST00000460940 LRRC10BA6NIK2 292 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 C19orf67A6NJJ6 358 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 LGALS16A8MUM7 142 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 LOC730098B7Z3J9 87 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 SOAT2O75908 522 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 CSH1P0DML2 217 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 CSH2P0DML3 217 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 BDNFP23560 247 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 PON1P27169 355 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 ANXA13P27216 316 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 GTF2A1P52655 376 aaPredicted RBP11.75□□□□□ -0.53
APTX-209ENST00000460940 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
APTX-209ENST00000460940 MFAP3P55082 362 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 IQCB1Q15051 598 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 CYP4A22Q5TCH4 519 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 PDZD4Q76G19 769 aaPredicted RBP11.75□□□□□ -0.53
APTX-209ENST00000460940 ARHGEF19Q8IW93 802 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 FEZF2Q8TBJ5 459 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 ACSF2Q96CM8 615 aaPredicted RBP11.75□□□□□ -0.53
APTX-209ENST00000460940 TMEM176AQ96HP8 235 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 UHRF1Q96T88 793 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms