RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 SDHAF4Q5VUM1 108 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 PEAR1Q5VY43 1037 aaPredicted RBP12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 WSCD1Q658N2 575 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 ARMCX6Q7L4S7 300 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 LPCAT2Q7L5N7 544 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 RAB44Q7Z6P3 723 aaPredicted RBP12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 SFTPA1Q8IWL2 248 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 EFCAB13Q8IY85 973 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 TMEFF1Q8IYR6 380 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 CCDC26Q8TAB7 109 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 KCNN1Q92952 543 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 TMEM206Q9H813 350 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 RPF1Q9H9Y2 349 aaKnown RBP12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 FSCN3Q9NQT6 498 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 MAGED2Q9UNF1 606 aaPredicted RBP12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 PTPRBP23467 1997 aa12.54□□□□□ -0.4
PCYT1A-213ENST00000460827 CYB561D2O14569 222 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 NCKAP1LP55160 1127 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 MESP2Q0VG99 397 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 SAFBQ15424 915 aaKnown RBP eCLIP12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 IL17AQ16552 155 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 ZC2HC1CQ53FD0 456 aaPredicted RBP12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 METTL23Q86XA0 190 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 THEM5Q8N1Q8 247 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 BICD1Q96G01 975 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 TRMT2BQ96GJ1 504 aaKnown RBP12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 MYRFLQ96LU7 910 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 PYM1Q9BRP8 204 aaKnown RBP12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 PI4K2AQ9BTU6 479 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 CCSER1Q9C0I3 900 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 FOXP1Q9H334 677 aaPredicted RBP12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 TRPC7Q9HCX4 862 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 GCNT4Q9P109 453 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 KCNG1Q9UIX4 513 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 PILRBQ9UKJ0 227 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 PCDHB5Q9Y5E4 795 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 PTPRQQ9UMZ3 2332 aa12.53□□□□□ -0.4
PCYT1A-213ENST00000460827 A0A0B4J269 797 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 NOL4O94818 638 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 PIGRP01833 764 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 CKMP06732 381 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 USP17L7P0C7H9 530 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 TCF3P15923 654 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 ITPKAP23677 461 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 TRAPPC10P48553 1259 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 LIG4P49917 911 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 SCAPQ12770 1279 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 NR1H3Q13133 447 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 TMEM132DQ14C87 1099 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 DDR2Q16832 855 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 COL28A1Q2UY09 1125 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 MAP7D1Q3KQU3 841 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 SPDYCQ5MJ68 293 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 KRT79Q5XKE5 535 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 TTC30AQ86WT1 665 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 CD302Q8IX05 232 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 DCP1BQ8IZD4 617 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 SH3RF2Q8TEC5 729 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 LRRC15Q8TF66 581 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 BBC3Q96PG8 261 aaPredicted RBP12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 CAPN10Q9HC96 672 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 CPSF3Q9UKF6 684 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 DERAQ9Y315 318 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 ATXN2Q99700 1313 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 SPTA1P02549 2419 aa12.52□□□□□ -0.41
PCYT1A-213ENST00000460827 TRAV19A0A0A6YYK7 116 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 NPHP3-ACAD11A0A0J9YXS1 232 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 C2orf78A6NCI8 922 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 SGK1O00141 431 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 HNRNPDLO14979 420 aaKnown RBP12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 CFIP05156 583 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 CD59P13987 128 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 HOXD12P35452 270 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 TAF6P49848 677 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 TOB1P50616 345 aaPredicted RBP12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 SLC12A3P55017 1021 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 MRPS21P82921 87 aaKnown RBP12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 ZXDBP98169 803 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 ZNF423Q2M1K9 1284 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 LYSMD4Q5XG99 296 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 SLC39A4Q6P5W5 647 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 ALLCQ8N6M5 410 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 ARL14EPQ8N8R7 260 aaPredicted RBP12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 SYT2Q8N9I0 419 aaPredicted RBP12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 IL17RCQ8NAC3 791 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 TXNDC5Q8NBS9 432 aaKnown RBP12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 WHAMMQ8TF30 809 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 LEO1Q8WVC0 666 aaPredicted RBP12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 SPACA7Q96KW9 195 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 RAB34Q9BZG1 259 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 UXTQ9UBK9 157 aaPredicted RBP12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 HECTD1Q9ULT8 2610 aa12.51□□□□□ -0.41
PCYT1A-213ENST00000460827 ALDH1A2O94788 518 aa12.5□□□□□ -0.41
PCYT1A-213ENST00000460827 ZIC2O95409 532 aaPredicted RBP12.5□□□□□ -0.41
PCYT1A-213ENST00000460827 KLF8O95600 359 aaPredicted RBP12.5□□□□□ -0.41
PCYT1A-213ENST00000460827 NFATC1O95644 943 aa12.5□□□□□ -0.41
PCYT1A-213ENST00000460827 SERPINF2P08697 491 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms