RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 PPM1AP35813 382 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 BMPR1AP36894 532 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 GCLCP48506 637 aaPredicted RBP4.12□□□□□ -1.75
RFC4-211ENST00000460408 LOXL3P58215 753 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 HLXQ14774 488 aaPredicted RBP4.12□□□□□ -1.75
RFC4-211ENST00000460408 MPEG1Q2M385 716 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 TIGD2Q4W5G0 525 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 FAM83BQ5T0W9 1011 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 FCRL6Q6DN72 434 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 FOXR2Q6PJQ5 311 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 SLC30A10Q6XR72 485 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 CATSPERGQ6ZRH7 1159 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 CLNKQ7Z7G1 428 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 ZNF280BQ86YH2 543 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 ADGRG5Q8IZF4 528 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 FAM109AQ8N4B1 249 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 VGLL2Q8N8G2 317 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 MORC4Q8TE76 937 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 RAPGEF4Q8WZA2 1011 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 MYEOVQ96EZ4 313 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 MOGAT1Q96PD6 335 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 STK31Q9BXU1 1019 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 TTYH3Q9C0H2 523 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 PTPRHQ9HD43 1115 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 GJB4Q9NTQ9 266 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 TRMT13Q9NUP7 481 aaKnown RBP4.12□□□□□ -1.75
RFC4-211ENST00000460408 RNF181Q9P0P0 153 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 MID2Q9UJV3 735 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 TBC1D30Q9Y2I9 924 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 MAP3K2Q9Y2U5 619 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 SPATA31A3Q5VYP0 1347 aa4.12□□□□□ -1.75
RFC4-211ENST00000460408 SETD1BQ9UPS6 1966 aaKnown RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 PLEKHD1A6NEE1 506 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 TMEM200CA6NKL6 621 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 AREL1O15033 823 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 ERN1O75460 977 aaKnown RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 EIF3JO75822 258 aaKnown RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 BTF3P20290 206 aaKnown RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 ACVR2AP27037 513 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 IL1R2P27930 398 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 HSPA7P48741 367 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 VAV2P52735 878 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 LILRA4P59901 499 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 KRTAP10-9P60411 292 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 RPS7P62081 194 aaKnown RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 SCAPQ12770 1279 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 STK3Q13188 491 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 NPY5RQ15761 445 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 GEN1Q17RS7 908 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 ARL13BQ3SXY8 428 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 CD300EQ496F6 205 aaPredicted RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 PLA1AQ53H76 456 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 SP5Q6BEB4 398 aaPredicted RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 ARMC6Q6NXE6 501 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 ERAP2Q6P179 960 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 C1orf228Q6PIY5 440 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 TMEM108Q6UXF1 575 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 Q6YL49 198 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 MICALCLQ6ZW33 695 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 ENAHQ8N8S7 591 aaPredicted RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 FANCBQ8NB91 859 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 CPEB3Q8NE35 698 aaKnown RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 ACRBPQ8NEB7 543 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 VPS37AQ8NEZ2 397 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 PSMD1Q99460 953 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 SELENOOQ9BVL4 669 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 ALOXE3Q9BYJ1 711 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 DHX36Q9H2U1 1008 aaKnown RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 UNKLQ9H9P5 680 aaKnown RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 CYP4F11Q9HBI6 524 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 AS3MTQ9HBK9 375 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 ARFGAP3Q9NP61 516 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 DNMT3BQ9UBC3 853 aaKnown RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 ZNF212Q9UDV6 495 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 CDC23Q9UJX2 597 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 CAPN11Q9UMQ6 739 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 MTO1Q9Y2Z2 717 aaKnown RBP4.11□□□□□ -1.75
RFC4-211ENST00000460408 PCDHGB2Q9Y5G2 931 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.11□□□□□ -1.75
RFC4-211ENST00000460408 ABCC9O60706 1549 aa4.11□□□□□ -1.75
RFC4-211ENST00000460408 CENPVL1A0A0U1RR11 272 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 LOC102723971A0A1B0GUV8 181 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 TOR1BO14657 336 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 THAP12O43422 761 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 PLA2G6O60733 806 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 RASSF9O75901 435 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 CDKL5O76039 1030 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 CDK4P11802 303 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 LAG3P18627 525 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 ITGALP20701 1170 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 GATA3P23771 443 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 EEF1GP26641 437 aaKnown RBP4.1□□□□□ -1.75
RFC4-211ENST00000460408 PPIFP30405 207 aaKnown RBP4.1□□□□□ -1.75
RFC4-211ENST00000460408 LRPAP1P30533 357 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 ZEB1P37275 1124 aaPredicted RBP4.1□□□□□ -1.75
RFC4-211ENST00000460408 NPTX2P47972 431 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 PXNP49023 591 aaPredicted RBP4.1□□□□□ -1.75
RFC4-211ENST00000460408 CHAF1AQ13111 956 aaPredicted RBP4.1□□□□□ -1.75
RFC4-211ENST00000460408 RESTQ13127 1097 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 TUBB8Q3ZCM7 444 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms