RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 FAM160A1Q05DH4 1040 aa24.35■■□□□ 1.49
PTPN4-207ENST00000460162 RUNX3Q13761 415 aa24.35■■□□□ 1.49
PTPN4-207ENST00000460162 KNOP1Q1ED39 458 aaKnown RBP24.35■■□□□ 1.49
PTPN4-207ENST00000460162 CC2D1AQ6P1N0 951 aaPredicted RBP24.35■■□□□ 1.49
PTPN4-207ENST00000460162 FSIP1Q8NA03 581 aa24.35■■□□□ 1.49
PTPN4-207ENST00000460162 GOLGA5Q8TBA6 731 aa24.35■■□□□ 1.49
PTPN4-207ENST00000460162 CCDC127Q96BQ5 260 aa24.35■■□□□ 1.49
PTPN4-207ENST00000460162 SPATA17Q96L03 361 aa24.35■■□□□ 1.49
PTPN4-207ENST00000460162 HPS4Q9NQG7 708 aa24.35■■□□□ 1.49
PTPN4-207ENST00000460162 RCOR1Q9UKL0 485 aa24.35■■□□□ 1.49
PTPN4-207ENST00000460162 TRAV19A0A0A6YYK7 116 aa24.34■■□□□ 1.49
PTPN4-207ENST00000460162 FAM163BP0C2L3 166 aa24.34■■□□□ 1.49
PTPN4-207ENST00000460162 SLFN14P0C7P3 912 aa24.34■■□□□ 1.49
PTPN4-207ENST00000460162 USP4Q13107 963 aa24.34■■□□□ 1.49
PTPN4-207ENST00000460162 PDGFRLQ15198 375 aa24.34■■□□□ 1.49
PTPN4-207ENST00000460162 GPR161Q8N6U8 529 aaKnown RBP24.34■■□□□ 1.49
PTPN4-207ENST00000460162 RIN3Q8TB24 985 aa24.34■■□□□ 1.49
PTPN4-207ENST00000460162 TRPC7Q9HCX4 862 aa24.34■■□□□ 1.49
PTPN4-207ENST00000460162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.33■■□□□ 1.49
PTPN4-207ENST00000460162 ACTN4O43707 911 aaKnown RBP24.33■■□□□ 1.49
PTPN4-207ENST00000460162 EXOC3O60645 756 aa24.33■■□□□ 1.49
PTPN4-207ENST00000460162 CKMP06732 381 aa24.33■■□□□ 1.49
PTPN4-207ENST00000460162 USP17L7P0C7H9 530 aa24.33■■□□□ 1.49
PTPN4-207ENST00000460162 TNNC1P63316 161 aa24.33■■□□□ 1.49
PTPN4-207ENST00000460162 MTF1Q14872 753 aa24.33■■□□□ 1.49
PTPN4-207ENST00000460162 MYCBPAPQ8TBZ2 947 aa24.33■■□□□ 1.49
PTPN4-207ENST00000460162 PCED1BQ96HM7 432 aa24.33■■□□□ 1.49
PTPN4-207ENST00000460162 MRPL45Q9BRJ2 306 aaKnown RBP24.33■■□□□ 1.49
PTPN4-207ENST00000460162 GZF1Q9H116 711 aaPredicted RBP24.33■■□□□ 1.49
PTPN4-207ENST00000460162 SNX25Q9H3E2 840 aa24.33■■□□□ 1.49
PTPN4-207ENST00000460162 EBF3Q9H4W6 596 aa24.33■■□□□ 1.49
PTPN4-207ENST00000460162 EHD2Q9NZN4 543 aa24.33■■□□□ 1.49
PTPN4-207ENST00000460162 TRIM66O15016 1216 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 CST3P01034 146 aaPredicted RBP24.32■■□□□ 1.48
PTPN4-207ENST00000460162 BDNFP23560 247 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 ANXA13P27216 316 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 ATICP31939 592 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 PDE6CP51160 858 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 AMPD2Q01433 879 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 CYP27A1Q02318 531 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 TRPC3Q13507 836 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 ZNF77Q15935 545 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 WDR72Q3MJ13 1102 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 TRIM68Q6AZZ1 485 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 GRAMD1CQ8IYS0 662 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 SYAP1Q96A49 352 aaPredicted RBP24.32■■□□□ 1.48
PTPN4-207ENST00000460162 RMDN1Q96DB5 314 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 EXOC1Q9NV70 894 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 SERTAD1Q9UHV2 236 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 GMEB2Q9UKD1 530 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 RAB23Q9ULC3 237 aa24.32■■□□□ 1.48
PTPN4-207ENST00000460162 K7ESF4 209 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 KLRC4O43908 158 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 PDGFRBP09619 1106 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 PFKLP17858 780 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 GNL1P36915 607 aaPredicted RBP24.31■■□□□ 1.48
PTPN4-207ENST00000460162 GRIK1P39086 918 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 KCNB1Q14721 858 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 TMEM196Q5HYL7 178 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 MDH1BQ5I0G3 518 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 DENND5BQ6ZUT9 1274 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 KIAA0895Q8NCT3 520 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 CHFRQ96EP1 664 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 USP25Q9UHP3 1055 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 NME7Q9Y5B8 376 aa24.31■■□□□ 1.48
PTPN4-207ENST00000460162 OTOL1A6NHN0 477 aaPredicted RBP24.3■■□□□ 1.48
PTPN4-207ENST00000460162 TRDMT1O14717 391 aaKnown RBP24.3■■□□□ 1.48
PTPN4-207ENST00000460162 MYL1P05976 194 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 TCF3P15923 654 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 PFKFB1P16118 471 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 HOXA6P31267 233 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 CNR2P34972 360 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 AP3M2P53677 418 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 GRSF1Q12849 480 aaKnown RBP eCLIP24.3■■□□□ 1.48
PTPN4-207ENST00000460162 PSMD2Q13200 908 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 LAIR1Q6GTX8 287 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 CPA6Q8N4T0 437 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 SPRYD3Q8NCJ5 442 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 OR6B3Q8NGW1 331 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 TMEM174Q8WUU8 243 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 ZNF516Q92618 1163 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 PAGE5Q96GU1 130 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 SLC22A12Q96S37 553 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 TTLL2Q9BWV7 592 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 ELOVL4Q9GZR5 314 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 XYLT2Q9H1B5 865 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 VRTNQ9H8Y1 702 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 GCNT4Q9P109 453 aa24.3■■□□□ 1.48
PTPN4-207ENST00000460162 KIAA1549LQ6ZVL6 1849 aa24.29■■□□□ 1.48
PTPN4-207ENST00000460162 ARSAP15289 507 aa24.29■■□□□ 1.48
PTPN4-207ENST00000460162 MYL6P60660 151 aa24.29■■□□□ 1.48
PTPN4-207ENST00000460162 NOP14P78316 857 aaKnown RBP24.29■■□□□ 1.48
PTPN4-207ENST00000460162 FSTL4Q6MZW2 842 aa24.29■■□□□ 1.48
PTPN4-207ENST00000460162 LONP2Q86WA8 852 aa24.29■■□□□ 1.48
PTPN4-207ENST00000460162 SLC9A9Q8IVB4 645 aa24.29■■□□□ 1.48
PTPN4-207ENST00000460162 OSCP1Q8WVF1 389 aa24.29■■□□□ 1.48
PTPN4-207ENST00000460162 ATP2A3Q93084 1043 aa24.29■■□□□ 1.48
PTPN4-207ENST00000460162 EXOC4Q96A65 974 aa24.29■■□□□ 1.48
PTPN4-207ENST00000460162 C8orf48Q96LL4 319 aa24.29■■□□□ 1.48
PTPN4-207ENST00000460162 ARHGAP26Q9UNA1 814 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms