RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.76■■□□□ 1.71
U2AF1-204ENST00000459639 V9GYY5 206 aaPredicted RBP25.76■■□□□ 1.71
U2AF1-204ENST00000459639 F8W810 466 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 TULP2O00295 520 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 PLA2G4AP47712 749 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 RPL34P49207 117 aaKnown RBP25.75■■□□□ 1.71
U2AF1-204ENST00000459639 RGS7P49802 495 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 CPNE8Q86YQ8 564 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 RASGEF1CQ8N431 466 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 ACTRT1Q8TDG2 376 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 FNIP1Q8TF40 1166 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 ALG3Q92685 438 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 MS4A14Q96JA4 679 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 DUSP16Q9BY84 665 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 PCDHA3Q9Y5H8 950 aa25.75■■□□□ 1.71
U2AF1-204ENST00000459639 XPO1O14980 1071 aaKnown RBP25.74■■□□□ 1.71
U2AF1-204ENST00000459639 TRAPPC3O43617 180 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 CEP104O60308 925 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 PEX5P50542 639 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 SLC8A3P57103 927 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 PIGHQ14442 188 aaPredicted RBP25.74■■□□□ 1.71
U2AF1-204ENST00000459639 TEX35Q5T0J7 233 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 DCAF12L1Q5VU92 463 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 OVOS1Q6IE37 1185 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 ZDHHC17Q8IUH5 632 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 THEM5Q8N1Q8 247 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 NIPA2Q8N8Q9 360 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 MYCBPAPQ8TBZ2 947 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 KRT35Q92764 455 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 HSFY1Q96LI6 401 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 TMEM175Q9BSA9 504 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 METTL5Q9NRN9 209 aaKnown RBP25.74■■□□□ 1.71
U2AF1-204ENST00000459639 PRG3Q9Y2Y8 225 aaPredicted RBP25.74■■□□□ 1.71
U2AF1-204ENST00000459639 TRIM43BA6NCK2 446 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 TBKBP1A7MCY6 615 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 NPR3P17342 541 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 ACADSBP45954 432 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 ZNF252P-AS1Q0IIN9 211 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 CCDC142Q17RM4 750 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 ERCC6LQ2NKX8 1250 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 INTS6LQ5JSJ4 861 aaKnown RBP25.74■■□□□ 1.71
U2AF1-204ENST00000459639 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.74■■□□□ 1.71
U2AF1-204ENST00000459639 FAM183BPQ6ZVS7 135 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 PAQR9Q6ZVX9 377 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 LRRC43Q8N309 656 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 TRIM43Q96BQ3 446 aaPredicted RBP25.74■■□□□ 1.71
U2AF1-204ENST00000459639 B3GNT5Q9BYG0 378 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 PRDM5Q9NQX1 630 aaPredicted RBP25.74■■□□□ 1.71
U2AF1-204ENST00000459639 EHD2Q9NZN4 543 aa25.74■■□□□ 1.71
U2AF1-204ENST00000459639 TTC7AQ9ULT0 858 aaPredicted RBP25.74■■□□□ 1.71
U2AF1-204ENST00000459639 PTPRDP23468 1912 aa25.73■■□□□ 1.71
U2AF1-204ENST00000459639 ABHD14A-ACY1A0A1B0GW23 586 aa25.73■■□□□ 1.71
U2AF1-204ENST00000459639 PGRMC1O00264 195 aaKnown RBP25.73■■□□□ 1.71
U2AF1-204ENST00000459639 RFC1P35251 1148 aaPredicted RBP25.73■■□□□ 1.71
U2AF1-204ENST00000459639 MARCKSL1P49006 195 aa25.73■■□□□ 1.71
U2AF1-204ENST00000459639 NAA30Q147X3 362 aaPredicted RBP25.73■■□□□ 1.71
U2AF1-204ENST00000459639 FAM102AQ5T9C2 384 aaPredicted RBP25.73■■□□□ 1.71
U2AF1-204ENST00000459639 OR6B2Q6IFH4 312 aa25.73■■□□□ 1.71
U2AF1-204ENST00000459639 MED10Q9BTT4 135 aa25.73■■□□□ 1.71
U2AF1-204ENST00000459639 NLRC5Q86WI3 1866 aa25.73■■□□□ 1.71
U2AF1-204ENST00000459639 VWA8A3KMH1 1905 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 MYBPHLA2RUH7 354 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 NRP1O14786 923 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 TADA2AO75478 443 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 FAM200BP0CF97 657 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 RAG1P15918 1043 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 OGDHQ02218 1023 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 FAM35AQ86V20 835 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 SPATA4Q8NEY3 305 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 JOSD2Q8TAC2 188 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 TSC1Q92574 1164 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 PCED1BQ96HM7 432 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.72■■□□□ 1.71
U2AF1-204ENST00000459639 COLEC11Q9BWP8 271 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 SMARCAL1Q9NZC9 954 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 ADAM28Q9UKQ2 775 aa25.72■■□□□ 1.71
U2AF1-204ENST00000459639 CLDN5O00501 218 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 SYN3O14994 580 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 PSTPIP1O43586 416 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 ITGB8P26012 769 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 SCNN1AP37088 669 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 RWDD2BP57060 319 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 YWHAHQ04917 246 aaPredicted RBP25.71■■□□□ 1.71
U2AF1-204ENST00000459639 ELF2Q15723 593 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 CLUL1Q15846 466 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 MFSD5Q6N075 450 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 FAM171BQ6P995 826 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 OLFML1Q6UWY5 402 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 RNPC3Q96LT9 517 aaKnown RBP25.71■■□□□ 1.71
U2AF1-204ENST00000459639 PKMYT1Q99640 499 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 MCOLN1Q9GZU1 580 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 PRDM10Q9NQV6 1147 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 KRT82Q9NSB4 513 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.71■■□□□ 1.71
U2AF1-204ENST00000459639 COL4A6Q14031 1691 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 EFCAB14O75071 495 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 ALDH2P05091 517 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 SLC11A1P49279 550 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 MAPRE1Q15691 268 aaKnown RBP25.71■■□□□ 1.71
U2AF1-204ENST00000459639 RHOT1Q8IXI2 618 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms