RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 GTF3C4Q9UKN8 822 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 SMC3Q9UQE7 1217 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 WNT6Q9Y6F9 365 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 SPEGQ15772 3267 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 FAM208BQ5VWN6 2430 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 KIAA1549LQ6ZVL6 1849 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 ZNF638Q14966 1978 aaKnown RBP11.18□□□□□ -0.62
HDLBP-227ENST00000458564 LNP1A1A4G5 178 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 FRMD3A2A2Y4 597 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 MYMKA6NI61 221 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 NFATC1O95644 943 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 CAVIN2O95810 425 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 RBP5P82980 135 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 NR1H3Q13133 447 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 KCNB1Q14721 858 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 CCDC142Q17RM4 750 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 SOWAHAQ2M3V2 549 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 LARP1BQ659C4 914 aaKnown RBP11.18□□□□□ -0.62
HDLBP-227ENST00000458564 PMS2CLQ68D20 193 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 VSTM1Q6UX27 236 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 USP49Q70CQ1 688 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 DPH6Q7L8W6 267 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 DYMQ7RTS9 669 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 OSTM1Q86WC4 334 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 RASSF3Q86WH2 238 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 SPATA2LQ8IUW3 424 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-227ENST00000458564 CSGALNACT2Q8N6G5 542 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 ZSWIM2Q8NEG5 633 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 SH3RF2Q8TEC5 729 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 USP33Q8TEY7 942 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 SAAL1Q96ER3 474 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 SPATA17Q96L03 361 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 CNOT6LQ96LI5 555 aaKnown RBP11.18□□□□□ -0.62
HDLBP-227ENST00000458564 CYP2S1Q96SQ9 504 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 MTMR12Q9C0I1 747 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 TRPC7Q9HCX4 862 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 CCDC39Q9UFE4 941 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-227ENST00000458564 PCDHB13Q9Y5F0 798 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 SNX9Q9Y5X1 595 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 ATG2BQ96BY7 2078 aa11.18□□□□□ -0.62
HDLBP-227ENST00000458564 C2orf78A6NCI8 922 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 DCLK1O15075 740 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 KIAA0391O15091 583 aaKnown RBP11.17□□□□□ -0.62
HDLBP-227ENST00000458564 GCNT3O95395 438 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 OPRD1P41143 372 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 CASP5P51878 434 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 CREB5Q02930 508 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 MAPRE1Q15691 268 aaKnown RBP11.17□□□□□ -0.62
HDLBP-227ENST00000458564 GAB4Q2WGN9 574 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 SCARA3Q6AZY7 606 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 PSAPL1Q6NUJ1 521 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 C4orf50Q6ZRC1 276 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 ARL14EPQ8N8R7 260 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-227ENST00000458564 TSTD1Q8NFU3 115 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 KBTBD7Q8WVZ9 684 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 CBWD1Q9BRT8 395 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 TTLL2Q9BWV7 592 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 FBXO2Q9UK22 296 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-227ENST00000458564 SRPRBQ9Y5M8 271 aaKnown RBP11.17□□□□□ -0.62
HDLBP-227ENST00000458564 MORC2Q9Y6X9 1032 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-227ENST00000458564 ANAPC1Q9H1A4 1944 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 MYO16Q9Y6X6 1858 aa11.17□□□□□ -0.62
HDLBP-227ENST00000458564 IGF2RP11717 2491 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 K7EQS6 105 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 HCRTO43612 131 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 OLFM2O95897 454 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 PROS1P07225 676 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 KRT19P08727 400 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 TMEM191BP0C7N4 346 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-227ENST00000458564 HDCP19113 662 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 TXLNAP40222 546 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 PPP3CCP48454 512 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 DGKEP52429 567 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 NOP14P78316 857 aaKnown RBP11.16□□□□□ -0.62
HDLBP-227ENST00000458564 SLC7A9P82251 487 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 ZXDBP98169 803 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 MYO1EQ12965 1108 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 USP39Q53GS9 565 aaKnown RBP11.16□□□□□ -0.62
HDLBP-227ENST00000458564 DAB2IPQ5VWQ8 1189 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 DENND5BQ6ZUT9 1274 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 SV2BQ7L1I2 683 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 SCN4BQ8IWT1 228 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 MYLPFQ96A32 169 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 FAM84AQ96KN4 292 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 SYT15Q9BQS2 421 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 LINC00597Q9H2U6 94 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 PDE11AQ9HCR9 933 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 INTS13Q9NVM9 706 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 EHD2Q9NZN4 543 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 TBC1D7Q9P0N9 293 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 CDH9Q9ULB4 789 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 MMP17Q9ULZ9 603 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 WASF3Q9UPY6 502 aa11.16□□□□□ -0.62
HDLBP-227ENST00000458564 HELZP42694 1942 aaKnown RBP11.15□□□□□ -0.62
HDLBP-227ENST00000458564 PTPRJQ12913 1337 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 GOLGA8IPA6NC78 632 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 GOLGA8JA6NMD2 632 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 C4orf47A7E2U8 309 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms