RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 MIF4GDA9UHW6 222 aaKnown RBP9.47□□□□□ -0.89
VPS50-207ENST00000458530 DYNC1I1O14576 645 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 PTGESO14684 152 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 INPPL1O15357 1258 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 HOXA2O43364 376 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 ATP1A1P05023 1023 aaKnown RBP9.47□□□□□ -0.89
VPS50-207ENST00000458530 CTAGE8P0CG41 777 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 SETSIPP0DME0 302 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 ALADP13716 330 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 DESP17661 470 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 BRD2P25440 801 aaKnown RBP9.47□□□□□ -0.89
VPS50-207ENST00000458530 CDH5P33151 784 aaPredicted RBP9.47□□□□□ -0.89
VPS50-207ENST00000458530 PAFAH1B1P43034 410 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 RAP1GAPP47736 663 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 RAD23BP54727 409 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 AMPD2Q01433 879 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 RPS6KA1Q15418 735 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 CNGA2Q16280 664 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 ZNF394Q53GI3 561 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 MEI1Q5TIA1 1274 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 CCDC70Q6NSX1 233 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 CTAGE6Q86UF2 777 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 PALB2Q86YC2 1186 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 CTAGE4Q8IX94 777 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 MCOLN2Q8IZK6 566 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 UBL4BQ8N7F7 174 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 RNF169Q8NCN4 708 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 IPO4Q8TEX9 1081 aaKnown RBP9.47□□□□□ -0.89
VPS50-207ENST00000458530 GOLGA1Q92805 767 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 ELMO3Q96BJ8 720 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 HEXIM2Q96MH2 286 aaKnown RBP9.47□□□□□ -0.89
VPS50-207ENST00000458530 GAD1Q99259 594 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 NUP85Q9BW27 656 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 PLVAPQ9BX97 442 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 ELAC1Q9H777 363 aaKnown RBP9.47□□□□□ -0.89
VPS50-207ENST00000458530 TAS2R14Q9NYV8 317 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 ADAM22Q9P0K1 906 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 WDR35Q9P2L0 1181 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 KANSL3Q9P2N6 904 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 HESX1Q9UBX0 185 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 CNOT8Q9UFF9 292 aaKnown RBP9.47□□□□□ -0.89
VPS50-207ENST00000458530 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 A8MXQ7 604 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 PODXLO00592 558 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 ENC1O14682 589 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 FTCDO95954 541 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 WARSP23381 471 aaKnown RBP9.46□□□□□ -0.9
VPS50-207ENST00000458530 LHX1P48742 406 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 NDST1P52848 882 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 CDH8P55286 799 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 SLC8A3P57103 927 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 LILRA4P59901 499 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 ERVK-21P61565 698 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 TUSC3Q13454 348 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 TRAF7Q6Q0C0 670 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 AGMOQ6ZNB7 445 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 MON1BQ7L1V2 547 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 DEFB128Q7Z7B8 93 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 SLFN11Q7Z7L1 901 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 ERICH1Q86X53 443 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 METTL23Q86XA0 190 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 PASD1Q8IV76 773 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 ADGRF2Q8IZF7 708 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 ABI1Q8IZP0 508 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 LRRC57Q8N9N7 239 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 SLC4A11Q8NBS3 891 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 OR6B3Q8NGW1 331 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 GDPD5Q8WTR4 605 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 CPA5Q8WXQ8 436 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 CYFIP2Q96F07 1278 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 PBKQ96KB5 322 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 ZFP42Q96MM3 310 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 OSBPL9Q96SU4 736 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 NAP1L3Q99457 506 aaPredicted RBP9.46□□□□□ -0.9
VPS50-207ENST00000458530 C11orf70Q9BRQ4 267 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 SDCBP2Q9H190 292 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 SYNCQ9H7C4 482 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 ACP6Q9NPH0 428 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 PARVAQ9NVD7 372 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 TMEM161AQ9NX61 479 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 SALL4Q9UJQ4 1053 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 DSEQ9UL01 958 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.46□□□□□ -0.9
VPS50-207ENST00000458530 USP34Q70CQ2 3546 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 TTC3P53804 2025 aa9.46□□□□□ -0.9
VPS50-207ENST00000458530 TRIOO75962 3097 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 FNDC1Q4ZHG4 1894 aaPredicted RBP9.45□□□□□ -0.9
VPS50-207ENST00000458530 C9IYK1 514 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 M0QYV0 167 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 FANCGO15287 622 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 CTIFO43310 598 aaKnown RBP9.45□□□□□ -0.9
VPS50-207ENST00000458530 SPOPO43791 374 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 MGEA5O60502 916 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 BUB1BO60566 1050 aaPredicted RBP9.45□□□□□ -0.9
VPS50-207ENST00000458530 CXCL10P02778 98 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 ODC1P11926 461 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 IL9P15248 144 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 MMP8P22894 467 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 SLC1A1P43005 524 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 SCNN1GP51170 649 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms