RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ZNF606Q8WXB4 792 aa9.21□□□□□ -0.94
CLTCL1-204ENST00000458188 PDCL3Q9H2J4 239 aa9.21□□□□□ -0.94
CLTCL1-204ENST00000458188 HAUS4Q9H6D7 363 aa9.21□□□□□ -0.94
CLTCL1-204ENST00000458188 MAN1C1Q9NR34 630 aa9.21□□□□□ -0.94
CLTCL1-204ENST00000458188 SEPT11Q9NVA2 429 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-204ENST00000458188 AFF4Q9UHB7 1163 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-204ENST00000458188 CDH22Q9UJ99 828 aa9.21□□□□□ -0.94
CLTCL1-204ENST00000458188 TSPAN16Q9UKR8 245 aa9.21□□□□□ -0.94
CLTCL1-204ENST00000458188 GBF1Q92538 1859 aa9.21□□□□□ -0.94
CLTCL1-204ENST00000458188 CHD9Q3L8U1 2897 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 A0A1W2PQJ5 194 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 M0QYV0 167 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 O00370 1275 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 CCL16O15467 120 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 MFAP3LO75121 409 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 C8AP07357 584 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 HAPLN1P10915 354 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 CHRNB2P17787 502 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 RGS7P49802 495 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 CREMQ03060 361 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 DLX2Q07687 328 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 PDE4CQ08493 712 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 TWF1Q12792 350 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 IFRD2Q12894 506 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 MTMR3Q13615 1198 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 CLUL1Q15846 466 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 NFE2Q16621 373 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 ARHGAP17Q68EM7 881 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 C4orf50Q6ZRC1 276 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 PHLDB2Q86SQ0 1253 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 TTC30AQ86WT1 665 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 TTC39CQ8N584 583 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 TC2NQ8N9U0 490 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 ZMIZ2Q8NF64 920 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 ZNF397Q8NF99 534 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 SECISBP2LQ93073 1101 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 PCDHB18PQ96TA0 734 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 CHP1Q99653 195 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 HNRNPABQ99729 332 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 SMOQ99835 787 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 OXCT2Q9BYC2 517 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 EDEM3Q9BZQ6 932 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 KRT82Q9NSB4 513 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 CLDND1Q9NY35 253 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 COG5Q9UP83 839 aa9.2□□□□□ -0.94
CLTCL1-204ENST00000458188 KIAA1671Q9BY89 1806 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 FAM86C2PA6NEL3 165 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 TMCO5BA8MYB1 307 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 F8VP50 259 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 GLP2RO95838 553 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 TPM1P09493 284 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 FAM200BP0CF97 657 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 FERP16591 822 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 ATF6P18850 670 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 CDC25BP30305 580 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 PDE6CP51160 858 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 BPIFB4P59827 614 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 KLHL30Q0D2K2 578 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 ADAM15Q13444 863 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 MAPRE1Q15691 268 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 CNGA2Q16280 664 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 C2CD6Q53TS8 623 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 PPM1LQ5SGD2 360 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 TPGS2Q68CL5 300 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 WDR59Q6PJI9 974 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 LCLAT1Q6UWP7 414 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 TMC5Q6UXY8 1006 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 CLEC20AQ6ZU45 233 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 CCDC186Q7Z3E2 898 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 ZNF571Q7Z3V5 609 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 GPR65Q8IYL9 337 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 HS6ST3Q8IZP7 471 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 WDTC1Q8N5D0 677 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 ANKRD52Q8NB46 1076 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 OR8K1Q8NGG5 319 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 SPPL2BQ8TCT7 592 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 EPS8L1Q8TE68 723 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 CPA5Q8WXQ8 436 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 DDX1Q92499 740 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 NDRG1Q92597 394 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 AGPAT1Q99943 283 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 DUSP16Q9BY84 665 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 ABHD10Q9NUJ1 306 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 AIPL1Q9NZN9 384 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 LMCD1Q9NZU5 365 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 CYTH4Q9UIA0 394 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 NOCTQ9UK39 431 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 FBXW11Q9UKB1 542 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 KIAA1257Q9ULG3 409 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 MAGED2Q9UNF1 606 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 YIPF1Q9Y548 306 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 PDCD11Q14690 1871 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 PLXNA4Q9HCM2 1894 aa9.19□□□□□ -0.94
CLTCL1-204ENST00000458188 CCDC195A0A1B0GUA6 201 aa9.18□□□□□ -0.94
CLTCL1-204ENST00000458188 PRR33A8MZF0 331 aa9.18□□□□□ -0.94
CLTCL1-204ENST00000458188 PI4K2BG5E9Z4 385 aa9.18□□□□□ -0.94
CLTCL1-204ENST00000458188 H3BQ06 376 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-204ENST00000458188 MED7O43513 233 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms