RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CD44P16070 742 aaKnown RBP20.39■□□□□ 0.85
SNX27-204ENST00000458013 RUNX1T1Q06455 604 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 GRID1Q9ULK0 1009 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 PRDM15P57071 1507 aaPredicted RBP20.39■□□□□ 0.85
SNX27-204ENST00000458013 HSMCR30P0CW71 290 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 RBP3P10745 1247 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 CDH2P19022 906 aaPredicted RBP20.39■□□□□ 0.85
SNX27-204ENST00000458013 CYP51A1Q16850 503 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 IER5Q5VY09 327 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 TRIM48Q8IWZ4 208 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 TPCN2Q8NHX9 752 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 PSD3Q9NYI0 1048 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 CNTNAP5Q8WYK1 1306 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 F8W810 466 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 ALBP02768 609 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 THPOP40225 353 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 ERP44Q9BS26 406 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 IL25Q9H293 177 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 ARHGEF5Q12774 1597 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 E9PBE3 544 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 KLHL41O60662 606 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 ATP6V1B2P21281 511 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 PRIM2P49643 509 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 MAPK10P53779 464 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 ERVK-24P63145 666 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 REXO1L1PQ8IX06 675 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 DMAP1Q9NPF5 467 aaPredicted RBP20.38■□□□□ 0.85
SNX27-204ENST00000458013 TRMT6Q9UJA5 497 aaKnown RBP20.38■□□□□ 0.85
SNX27-204ENST00000458013 SNX13Q9Y5W8 968 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 ZNF682O95780 498 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 FNTAP49354 379 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 ISCUQ9H1K1 167 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 PDS5AQ29RF7 1337 aaKnown RBP20.38■□□□□ 0.85
SNX27-204ENST00000458013 RASA1P20936 1047 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 COPAP53621 1224 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 SPATA16Q9BXB7 569 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 NOD2Q9HC29 1040 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 CENPTQ96BT3 561 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 DDIT4Q9NX09 232 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 SLC25A13Q9UJS0 675 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 QRICH2Q9H0J4 1663 aa20.38■□□□□ 0.85
SNX27-204ENST00000458013 VWA5AO00534 786 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 RALBP11234 206 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 ALOX15P16050 662 aaPredicted RBP20.37■□□□□ 0.85
SNX27-204ENST00000458013 EZH2Q15910 746 aaKnown RBP20.37■□□□□ 0.85
SNX27-204ENST00000458013 ACAD10Q6JQN1 1059 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 RSAD1Q9HA92 442 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 CD4P01730 458 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 FAM200BP0CF97 657 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 TDRD10Q5VZ19 366 aaKnown RBP20.37■□□□□ 0.85
SNX27-204ENST00000458013 TMEM121Q9BTD3 319 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 TBX20Q9UMR3 447 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 FGFR2P21802 821 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 CCND1P24385 295 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 C16orf86Q6ZW13 317 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 ATG4CQ96DT6 458 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 MKNK1Q9BUB5 465 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 SNX8Q9Y5X2 465 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 IL18RAPO95256 599 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 CCSER1Q9C0I3 900 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 BGNP21810 368 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 HNRNPH1P31943 449 aaKnown RBP20.37■□□□□ 0.85
SNX27-204ENST00000458013 RGS4P49798 205 aa20.37■□□□□ 0.85
SNX27-204ENST00000458013 PON1P27169 355 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 BMPR2Q13873 1038 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 ROGDIQ9GZN7 287 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 LRRC7Q96NW7 1537 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 KATNA1O75449 491 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 RCAN1P53805 252 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 R3HDM1Q15032 1099 aaKnown RBP20.36■□□□□ 0.85
SNX27-204ENST00000458013 TEX13BQ9BXU2 312 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 KCTD19Q17RG1 926 aaPredicted RBP20.36■□□□□ 0.85
SNX27-204ENST00000458013 POTEAQ6S8J7 498 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 NUDT18Q6ZVK8 323 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 FICDQ9BVA6 458 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 WDR35Q9P2L0 1181 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 IRAK1P51617 712 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 CUL2Q13617 745 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 B3GALNT2Q8NCR0 500 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNX27-204ENST00000458013 TMEM253P0C7T8 217 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 UGP2Q16851 508 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 SLC30A9Q6PML9 568 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 NT5DC3Q86UY8 548 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 SLC47A2Q86VL8 602 aa20.36■□□□□ 0.85
SNX27-204ENST00000458013 A8MX80 341 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 EVPLLA8MZ36 301 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 FDPSP14324 419 aaKnown RBP20.35■□□□□ 0.85
SNX27-204ENST00000458013 FEN1P39748 380 aaKnown RBP20.35■□□□□ 0.85
SNX27-204ENST00000458013 KCNMA1Q12791 1236 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 RPRD1AQ96P16 312 aaPredicted RBP20.35■□□□□ 0.85
SNX27-204ENST00000458013 NSMCE4AQ9NXX6 385 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 UBXN8O00124 270 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 ASS1P00966 412 aaKnown RBP20.35■□□□□ 0.85
SNX27-204ENST00000458013 GSTM1P09488 218 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 KCNV1Q6PIU1 500 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 NMD3Q96D46 503 aaKnown RBP20.35■□□□□ 0.85
SNX27-204ENST00000458013 FAM129AQ9BZQ8 928 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 AP1G2O75843 785 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms